Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORA48.4-201ENST00000391089 134 ntBASIC5.94□□□□□ -1.46
RFX1P22670 PPIAP9-201ENST00000403866 498 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RPL7AP73-201ENST00000413490 353 ntBASIC5.94□□□□□ -1.46
RFX1P22670 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.94□□□□□ -1.46
RFX1P22670 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.94□□□□□ -1.46
RFX1P22670 AL133173.1-201ENST00000423458 397 ntBASIC5.94□□□□□ -1.46
RFX1P22670 SKA2P1-201ENST00000425592 390 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RPL23AP69-201ENST00000431134 458 ntBASIC5.94□□□□□ -1.46
RFX1P22670 SNAP23P1-201ENST00000433229 246 ntBASIC5.94□□□□□ -1.46
RFX1P22670 OR6D1P-201ENST00000436165 939 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RPL23AP89-201ENST00000439324 255 ntBASIC5.94□□□□□ -1.46
RFX1P22670 AC073850.1-201ENST00000449243 255 ntBASIC5.94□□□□□ -1.46
RFX1P22670 MRPS31P2-201ENST00000451581 518 ntBASIC5.94□□□□□ -1.46
RFX1P22670 FABP5P13-201ENST00000452144 328 ntBASIC5.94□□□□□ -1.46
RFX1P22670 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.94□□□□□ -1.46
RFX1P22670 DYNLL1P5-201ENST00000467158 270 ntBASIC5.94□□□□□ -1.46
RFX1P22670 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RPS24P16-201ENST00000497294 392 ntBASIC5.94□□□□□ -1.46
RFX1P22670 AC024558.1-201ENST00000505008 528 ntBASIC5.94□□□□□ -1.46
RFX1P22670 SNORA31.3-201ENST00000516029 96 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RN7SKP66-201ENST00000516681 231 ntBASIC5.94□□□□□ -1.46
RFX1P22670 RANP9-201ENST00000519957 271 ntBASIC5.94□□□□□ -1.46
RFX1P22670 AC126177.3-201ENST00000551839 688 ntBASIC5.94□□□□□ -1.46
RFX1P22670 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.94□□□□□ -1.46
RFX1P22670 HNRNPCP4-201ENST00000571636 900 ntBASIC5.94□□□□□ -1.46
RFX1P22670 MIR3671-201ENST00000580455 88 ntBASIC5.94□□□□□ -1.46
RFX1P22670 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.94□□□□□ -1.46
RFX1P22670 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.94□□□□□ -1.46
RFX1P22670 AL138726.1-201ENST00000614873 333 ntBASIC5.94□□□□□ -1.46
RFX1P22670 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 AL121839.2-201ENST00000565058 6943 ntBASIC5.94□□□□□ -1.46
RFX1P22670 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.94□□□□□ -1.46
RFX1P22670 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RFX1P22670 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RFX1P22670 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 ABCC13-202ENST00000463099 3842 ntBASIC5.94□□□□□ -1.46
RFX1P22670 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RFX1P22670 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFX1P22670 SOCS5P3-201ENST00000425115 1576 ntBASIC5.93□□□□□ -1.46
RFX1P22670 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFX1P22670 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 RN7SKP224-201ENST00000364140 325 ntBASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-593P-201ENST00000364716 112 ntBASIC5.93□□□□□ -1.46
RFX1P22670 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFX1P22670 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-14P-201ENST00000384630 106 ntBASIC5.93□□□□□ -1.46
RFX1P22670 SNORA16.2-201ENST00000390991 127 ntBASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-882P-201ENST00000391025 103 ntBASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-817P-201ENST00000391083 104 ntBASIC5.93□□□□□ -1.46
RFX1P22670 MIR450B-201ENST00000401182 78 ntBASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-954P-201ENST00000411355 107 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX1P22670 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX1P22670 RPL32P28-201ENST00000443577 397 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AL450023.1-201ENST00000450868 751 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AL162388.1-201ENST00000450912 352 ntBASIC5.93□□□□□ -1.46
RFX1P22670 ELOCP24-201ENST00000456370 334 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AP001086.1-201ENST00000494882 321 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC025164.1-201ENST00000496249 478 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 RNU6-677P-201ENST00000516914 101 ntBASIC5.93□□□□□ -1.46
RFX1P22670 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.93□□□□□ -1.46
RFX1P22670 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX1P22670 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.93□□□□□ -1.46
RFX1P22670 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 SNRPGP18-201ENST00000553000 214 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX1P22670 BNIP3P5-201ENST00000562290 498 ntBASIC5.93□□□□□ -1.46
RFX1P22670 MRPS21P7-201ENST00000566937 238 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC138761.3-201ENST00000579993 334 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC008737.2-201ENST00000599446 118 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.93□□□□□ -1.46
RFX1P22670 AC019193.3-201ENST00000609144 554 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 uc_338.22-201ENST00000622722 187 ntBASIC5.93□□□□□ -1.46
RFX1P22670 AC244517.12-201ENST00000623581 663 ntBASIC5.93□□□□□ -1.46
RFX1P22670 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RFX1P22670 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.93□□□□□ -1.46
RFX1P22670 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.93□□□□□ -1.46
RFX1P22670 AC144833.1-201ENST00000567953 4089 ntBASIC5.93□□□□□ -1.46
RFX1P22670 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.92□□□□□ -1.46
RFX1P22670 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.92□□□□□ -1.46
RFX1P22670 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RFX1P22670 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RFX1P22670 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms