Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AL109809.4-201ENST00000603520 2185 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL9A1P20849 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL9A1P20849 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.28□□□□□ -1.4
COL9A1P20849 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.28□□□□□ -1.4
COL9A1P20849 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.28□□□□□ -1.4
COL9A1P20849 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.28□□□□□ -1.4
COL9A1P20849 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 RNU6-834P-201ENST00000362367 110 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 RNU6-312P-201ENST00000364629 107 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 RNU6-339P-201ENST00000384310 107 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 DUTP5-201ENST00000406790 469 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.28□□□□□ -1.4
COL9A1P20849 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.28□□□□□ -1.4
COL9A1P20849 AC245884.2-201ENST00000426257 404 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.28□□□□□ -1.4
COL9A1P20849 AC090958.1-201ENST00000511122 351 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.28□□□□□ -1.4
COL9A1P20849 RNU1-86P-201ENST00000516108 154 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 RNU1-107P-201ENST00000516617 154 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.28□□□□□ -1.4
COL9A1P20849 BNIP3P1-201ENST00000547295 580 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 EDDM3DP-201ENST00000554692 434 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AC233702.2-202ENST00000562547 291 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 MIR5692C2-201ENST00000577959 77 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.28□□□□□ -1.4
COL9A1P20849 AC011487.3-201ENST00000593607 453 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 MIR92B-201ENST00000607575 96 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 AC084757.4-201ENST00000616350 526 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 CU639417.4-201ENST00000623928 207 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.28□□□□□ -1.4
COL9A1P20849 OR4G2P-202ENST00000641004 1759 ntBASIC6.28□□□□□ -1.4
COL9A1P20849 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL9A1P20849 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
COL9A1P20849 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL9A1P20849 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL9A1P20849 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
COL9A1P20849 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL9A1P20849 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.27□□□□□ -1.41
COL9A1P20849 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
COL9A1P20849 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 RPL23P2-201ENST00000320371 421 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 BX322650.1-201ENST00000332359 2143 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 RNU1-32P-201ENST00000363937 159 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.27□□□□□ -1.41
COL9A1P20849 SNORA40-201ENST00000388090 126 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL9A1P20849 AC009804.1-201ENST00000400949 179 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 RNA5SP487-201ENST00000410186 122 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 HMGA1P8-201ENST00000414130 321 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 RPL7L1P9-201ENST00000431298 745 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 RN7SL222P-201ENST00000476452 299 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 AC092824.1-201ENST00000483524 576 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 AC010343.2-201ENST00000510162 224 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.27□□□□□ -1.41
COL9A1P20849 RNU6-1333P-201ENST00000516162 93 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.27□□□□□ -1.41
COL9A1P20849 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.27□□□□□ -1.41
COL9A1P20849 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.27□□□□□ -1.41
COL9A1P20849 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
COL9A1P20849 AC010329.2-201ENST00000595195 2737 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC6.27□□□□□ -1.41
COL9A1P20849 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.27□□□□□ -1.41
COL9A1P20849 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.27□□□□□ -1.41
COL9A1P20849 AC022325.1-201ENST00000502748 2199 ntBASIC6.27□□□□□ -1.41
COL9A1P20849 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL9A1P20849 MAPK10-270ENST00000641102 3538 ntBASIC6.26□□□□□ -1.41
COL9A1P20849 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL9A1P20849 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.26□□□□□ -1.41
COL9A1P20849 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL9A1P20849 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms