Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CFTRP13569 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CFTRP13569 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
CFTRP13569 DYNLT3P1-201ENST00000378574 347 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AL353597.2-202ENST00000434901 373 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AC124916.1-201ENST00000444020 547 ntBASIC3.22□□□□□ -1.89
CFTRP13569 RNU7-95P-201ENST00000459222 64 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AC107393.1-201ENST00000512403 346 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.22□□□□□ -1.89
CFTRP13569 MIR3670-2-201ENST00000582974 65 ntBASIC3.22□□□□□ -1.89
CFTRP13569 MIR3670-1-201ENST00000584160 65 ntBASIC3.22□□□□□ -1.89
CFTRP13569 MIR3670-3-201ENST00000584855 65 ntBASIC3.22□□□□□ -1.89
CFTRP13569 HMGN2P28-201ENST00000606102 262 ntBASIC3.22□□□□□ -1.89
CFTRP13569 MIR3670-4-201ENST00000612260 65 ntBASIC3.22□□□□□ -1.89
CFTRP13569 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.22□□□□□ -1.89
CFTRP13569 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.21□□□□□ -1.89
CFTRP13569 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CFTRP13569 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CFTRP13569 DHFRP5-201ENST00000406944 564 ntBASIC3.21□□□□□ -1.9
CFTRP13569 U3.37-201ENST00000408528 213 ntBASIC3.21□□□□□ -1.9
CFTRP13569 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.21□□□□□ -1.9
CFTRP13569 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.21□□□□□ -1.9
CFTRP13569 AC129850.1-201ENST00000436203 508 ntBASIC3.21□□□□□ -1.9
CFTRP13569 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.21□□□□□ -1.9
CFTRP13569 AC022431.1-201ENST00000450941 438 ntBASIC3.21□□□□□ -1.9
CFTRP13569 IFNWP4-201ENST00000453148 294 ntBASIC3.21□□□□□ -1.9
CFTRP13569 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.21□□□□□ -1.9
CFTRP13569 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.21□□□□□ -1.9
CFTRP13569 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.21□□□□□ -1.9
CFTRP13569 AC010546.1-201ENST00000569391 485 ntBASIC3.21□□□□□ -1.9
CFTRP13569 AC068790.3-201ENST00000602988 553 ntBASIC3.21□□□□□ -1.9
CFTRP13569 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.21□□□□□ -1.9
CFTRP13569 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.21□□□□□ -1.9
CFTRP13569 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CFTRP13569 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CFTRP13569 AC244517.1-201ENST00000606030 2086 ntBASIC3.2□□□□□ -1.9
CFTRP13569 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
CFTRP13569 CDC42P1-201ENST00000456658 548 ntBASIC3.2□□□□□ -1.9
CFTRP13569 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.2□□□□□ -1.9
CFTRP13569 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CFTRP13569 AC104435.1-201ENST00000483483 166 ntBASIC3.2□□□□□ -1.9
CFTRP13569 TTC39CP1-201ENST00000512513 755 ntBASIC3.2□□□□□ -1.9
CFTRP13569 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.2□□□□□ -1.9
CFTRP13569 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.2□□□□□ -1.9
CFTRP13569 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.2□□□□□ -1.9
CFTRP13569 AC092326.2-201ENST00000624772 1561 ntBASIC3.2□□□□□ -1.9
CFTRP13569 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.2□□□□□ -1.9
CFTRP13569 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.19□□□□□ -1.9
CFTRP13569 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFTRP13569 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFTRP13569 HMGB1P31-201ENST00000437242 427 ntBASIC3.19□□□□□ -1.9
CFTRP13569 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CFTRP13569 AP000926.1-201ENST00000479573 241 ntBASIC3.19□□□□□ -1.9
CFTRP13569 GZMAP1-201ENST00000503054 631 ntBASIC3.19□□□□□ -1.9
CFTRP13569 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.19□□□□□ -1.9
CFTRP13569 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFTRP13569 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CFTRP13569 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CFTRP13569 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CFTRP13569 RPL5P19-201ENST00000404228 893 ntBASIC3.18□□□□□ -1.9
CFTRP13569 RNU2-17P-201ENST00000410290 190 ntBASIC3.18□□□□□ -1.9
CFTRP13569 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.18□□□□□ -1.9
CFTRP13569 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
CFTRP13569 AC092473.1-201ENST00000441098 221 ntBASIC3.18□□□□□ -1.9
CFTRP13569 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.18□□□□□ -1.9
CFTRP13569 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
CFTRP13569 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.18□□□□□ -1.9
CFTRP13569 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CFTRP13569 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.18□□□□□ -1.9
CFTRP13569 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.18□□□□□ -1.9
CFTRP13569 AL135786.2-201ENST00000608422 615 ntBASIC3.18□□□□□ -1.9
CFTRP13569 AC090897.3-201ENST00000636973 1157 ntBASIC3.18□□□□□ -1.9
CFTRP13569 AL139811.1-201ENST00000424779 2299 ntBASIC3.18□□□□□ -1.9
CFTRP13569 XIAPP3-201ENST00000312918 795 ntBASIC3.17□□□□□ -1.9
CFTRP13569 Y_RNA.466-201ENST00000384294 113 ntBASIC3.17□□□□□ -1.9
CFTRP13569 HMGB3P10-201ENST00000434734 572 ntBASIC3.17□□□□□ -1.9
CFTRP13569 RPL39P40-201ENST00000445481 146 ntBASIC3.17□□□□□ -1.9
CFTRP13569 Z73417.1-201ENST00000447373 778 ntBASIC3.17□□□□□ -1.9
CFTRP13569 RPL23AP20-201ENST00000447965 421 ntBASIC3.17□□□□□ -1.9
CFTRP13569 LDHBP3-201ENST00000514909 822 ntBASIC3.17□□□□□ -1.9
CFTRP13569 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.17□□□□□ -1.9
CFTRP13569 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.17□□□□□ -1.9
CFTRP13569 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.17□□□□□ -1.9
CFTRP13569 AC000123.2-201ENST00000623124 461 ntBASIC3.17□□□□□ -1.9
CFTRP13569 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CFTRP13569 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AL590762.3-201ENST00000436372 640 ntBASIC3.16□□□□□ -1.9
CFTRP13569 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.16□□□□□ -1.9
CFTRP13569 AC004486.1-201ENST00000546846 233 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.16□□□□□ -1.9
CFTRP13569 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.16□□□□□ -1.9
CFTRP13569 OR4H12P-201ENST00000556269 907 ntBASIC3.16□□□□□ -1.9
CFTRP13569 RPP40P2-201ENST00000603596 712 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.16□□□□□ -1.9
CFTRP13569 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CFTRP13569 Z82209.1-201ENST00000422141 2135 ntBASIC3.16□□□□□ -1.9
CFTRP13569 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CFTRP13569 RNU6-392P-201ENST00000364926 101 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AC090543.1-201ENST00000492168 485 ntBASIC3.16□□□□□ -1.9
CFTRP13569 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms