Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL590099.1-201ENST00000615276 138 ntBASIC3.47□□□□□ -1.85
VIMP08670 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 AC079228.1-201ENST00000624774 1049 ntBASIC3.47□□□□□ -1.85
VIMP08670 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.47□□□□□ -1.85
VIMP08670 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 DDX43P2-201ENST00000604753 1354 ntBASIC3.47□□□□□ -1.85
VIMP08670 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
VIMP08670 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.46□□□□□ -1.85
VIMP08670 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VIMP08670 FRG1BP-201ENST00000278882 761 ntBASIC3.46□□□□□ -1.86
VIMP08670 RNU6-289P-201ENST00000364093 107 ntBASIC3.46□□□□□ -1.86
VIMP08670 RNU6-173P-201ENST00000364215 104 ntBASIC3.46□□□□□ -1.86
VIMP08670 U3.11-201ENST00000364476 212 ntBASIC3.46□□□□□ -1.86
VIMP08670 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 RPL22P18-201ENST00000417197 377 ntBASIC3.46□□□□□ -1.86
VIMP08670 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 MTND1P32-201ENST00000433043 938 ntBASIC3.46□□□□□ -1.86
VIMP08670 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 AC004866.2-201ENST00000438285 481 ntBASIC3.46□□□□□ -1.86
VIMP08670 HMGB3P11-201ENST00000440127 604 ntBASIC3.46□□□□□ -1.86
VIMP08670 HSFY6P-201ENST00000445573 403 ntBASIC3.46□□□□□ -1.86
VIMP08670 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 snoU13.8-201ENST00000458890 104 ntBASIC3.46□□□□□ -1.86
VIMP08670 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
VIMP08670 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 RPS26P21-201ENST00000475397 348 ntBASIC3.46□□□□□ -1.86
VIMP08670 AC108860.1-201ENST00000484521 383 ntBASIC3.46□□□□□ -1.86
VIMP08670 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 CBX3P3-201ENST00000508108 532 ntBASIC3.46□□□□□ -1.86
VIMP08670 RN7SKP265-201ENST00000516448 223 ntBASIC3.46□□□□□ -1.86
VIMP08670 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.46□□□□□ -1.86
VIMP08670 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 MED28P6-201ENST00000558776 231 ntBASIC3.46□□□□□ -1.86
VIMP08670 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 AL109653.1-201ENST00000603091 248 ntBASIC3.46□□□□□ -1.86
VIMP08670 AL591034.3-201ENST00000605511 685 ntBASIC3.46□□□□□ -1.86
VIMP08670 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.46□□□□□ -1.86
VIMP08670 AL139418.1-201ENST00000613613 177 ntBASIC3.46□□□□□ -1.86
VIMP08670 AL110115.1-201ENST00000614396 364 ntBASIC3.46□□□□□ -1.86
VIMP08670 MLECP1-201ENST00000615893 709 ntBASIC3.46□□□□□ -1.86
VIMP08670 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VIMP08670 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.46□□□□□ -1.86
VIMP08670 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.46□□□□□ -1.86
VIMP08670 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
VIMP08670 AP004289.2-201ENST00000444413 1457 ntBASIC3.46□□□□□ -1.86
VIMP08670 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VIMP08670 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VIMP08670 AC011477.1-204ENST00000623416 1325 ntBASIC3.45□□□□□ -1.86
VIMP08670 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 RNU6-777P-201ENST00000364265 104 ntBASIC3.45□□□□□ -1.86
VIMP08670 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VIMP08670 AL136372.1-201ENST00000403060 228 ntBASIC3.45□□□□□ -1.86
VIMP08670 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 RPL36AP36-201ENST00000418616 301 ntBASIC3.45□□□□□ -1.86
VIMP08670 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
VIMP08670 MTCO2P17-201ENST00000424336 677 ntBASIC3.45□□□□□ -1.86
VIMP08670 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 AC007967.1-201ENST00000455422 1159 ntBASIC3.45□□□□□ -1.86
VIMP08670 RN7SL459P-201ENST00000481078 302 ntBASIC3.45□□□□□ -1.86
VIMP08670 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VIMP08670 AC034244.1-201ENST00000507687 207 ntBASIC3.45□□□□□ -1.86
VIMP08670 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 RNU1-61P-201ENST00000516107 151 ntBASIC3.45□□□□□ -1.86
VIMP08670 RNU6-352P-201ENST00000516908 107 ntBASIC3.45□□□□□ -1.86
VIMP08670 RNU6-714P-201ENST00000516963 103 ntBASIC3.45□□□□□ -1.86
VIMP08670 AC105185.1-201ENST00000518705 535 ntBASIC3.45□□□□□ -1.86
VIMP08670 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VIMP08670 AC023050.2-201ENST00000544968 387 ntBASIC3.45□□□□□ -1.86
VIMP08670 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
VIMP08670 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.45□□□□□ -1.86
VIMP08670 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VIMP08670 AL596327.1-201ENST00000603629 213 ntBASIC3.45□□□□□ -1.86
VIMP08670 AC012443.1-201ENST00000605605 231 ntBASIC3.45□□□□□ -1.86
VIMP08670 AC106028.5-201ENST00000610332 395 ntBASIC3.45□□□□□ -1.86
VIMP08670 AL136981.2-201ENST00000617319 734 ntBASIC3.45□□□□□ -1.86
VIMP08670 AP003355.3-201ENST00000623465 114 ntBASIC3.45□□□□□ -1.86
VIMP08670 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VIMP08670 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
VIMP08670 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VIMP08670 TAB3P1-202ENST00000452645 1634 ntBASIC3.44□□□□□ -1.86
VIMP08670 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.44□□□□□ -1.86
VIMP08670 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms