Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 FAM60BP-201ENST00000578364 658 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MIR4637-201ENST00000582405 84 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AP001029.3-201ENST00000588063 596 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC083760.1-201ENST00000589621 670 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC091057.3-201ENST00000602684 733 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC069304.2-201ENST00000605154 435 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL627309.6-201ENST00000606857 840 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 MIR7851-201ENST00000610611 160 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL359198.2-201ENST00000611836 194 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL121772.2-201ENST00000614331 297 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL110115.1-201ENST00000614396 364 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC022306.3-201ENST00000619930 550 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC004009.2-201ENST00000623016 728 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 CR392039.5-201ENST00000623201 510 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AC010608.3-201ENST00000625048 527 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 AL034408.1-202ENST00000636088 415 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 CDR1-202ENST00000625883 1485 ntBASIC2.37□□□□□ -2.03
HLA-DQA1P01909 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DQA1P01909 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RNA5SP124-201ENST00000362739 110 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SNORA5A-201ENST00000384111 134 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL356967.1-201ENST00000406305 431 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RNA5SP80-201ENST00000410475 111 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RPS29P4-201ENST00000414733 161 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL451074.5-201ENST00000415894 435 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC018644.1-201ENST00000429934 551 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 MTND2P5-201ENST00000432656 1006 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RPL23AP74-201ENST00000437246 471 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL645638.1-201ENST00000440519 361 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 OR10R1P-201ENST00000441524 1141 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC093392.2-201ENST00000450682 337 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SSXP4-201ENST00000451349 245 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC073387.1-201ENST00000453261 709 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 OFD1P3Y-201ENST00000453312 783 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 Z82190.1-201ENST00000454534 490 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SNORD105B-201ENST00000458770 79 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 snoU109.3-201ENST00000459477 145 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RPL21P104-201ENST00000464143 478 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RPS4XP10-201ENST00000465034 731 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 RN7SL542P-201ENST00000467147 294 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC104164.3-201ENST00000467363 1258 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC011979.1-201ENST00000472300 483 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC090453.1-201ENST00000495560 436 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 COX7A2P2-201ENST00000505291 250 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 CBX3P3-201ENST00000508108 532 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 TRMT10BP1-201ENST00000519377 943 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC005832.3-201ENST00000537929 631 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SETP7-201ENST00000552169 453 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 HSPE1P3-201ENST00000559254 309 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC010653.1-201ENST00000571108 881 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AC093227.2-201ENST00000589357 285 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 MTND3P19-201ENST00000603825 345 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL391834.2-201ENST00000609982 546 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL157817.1-201ENST00000614264 790 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 AL392088.2-201ENST00000637607 285 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HLA-DQA1P01909 SGO1P2-201ENST00000429458 1589 ntBASIC2.36□□□□□ -2.03
HLA-DQA1P01909 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC116096.1-201ENST00000566804 2314 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 MIR218-2-201ENST00000385006 110 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL357075.1-201ENST00000404107 726 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL354719.1-201ENST00000406535 843 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AL591034.1-201ENST00000407447 340 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RNU4-22P-201ENST00000411058 166 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.35□□□□□ -2.03
HLA-DQA1P01909 DBIP2-201ENST00000419076 262 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 RPL21P40-201ENST00000428586 483 ntBASIC2.35□□□□□ -2.03
HLA-DQA1P01909 EZH2P1-201ENST00000431167 291 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms