Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
ABCA1O95477 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.78□□□□□ -2.12
ABCA1O95477 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
ABCA1O95477 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 AC007390.1-201ENST00000415722 356 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 ARF4P2-201ENST00000430209 526 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.78□□□□□ -2.13
ABCA1O95477 CCNHP1-201ENST00000513311 678 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 SCARNA16.3-201ENST00000516595 184 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 AP004242.1-201ENST00000533701 349 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 AC068339.2-201ENST00000534395 618 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA1O95477 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.78□□□□□ -2.13
ABCA1O95477 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.78□□□□□ -2.13
ABCA1O95477 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.78□□□□□ -2.13
ABCA1O95477 AC023043.2-201ENST00000589678 1026 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 AL356266.1-201ENST00000623311 483 ntBASIC1.78□□□□□ -2.13
ABCA1O95477 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.78□□□□□ -2.13
ABCA1O95477 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
ABCA1O95477 SEPT7P7-201ENST00000420492 1301 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 SNORD21-201ENST00000383953 95 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA1O95477 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.77□□□□□ -2.13
ABCA1O95477 TRIM60P18-201ENST00000441518 828 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA1O95477 AL118520.1-201ENST00000450770 291 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA1O95477 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC104986.1-201ENST00000517978 436 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC060766.3-201ENST00000591442 263 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AC006023.2-201ENST00000609916 167 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 FAM35CP-201ENST00000554755 2470 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ABCA1O95477 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ABCA1O95477 TAF9P1-201ENST00000445421 515 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.77□□□□□ -2.13
ABCA1O95477 AL445669.2-201ENST00000454425 421 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 TAF9P2-201ENST00000454958 515 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 MTCYBP20-201ENST00000524239 1129 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 OR4U1P-201ENST00000554958 912 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.77□□□□□ -2.13
ABCA1O95477 AC128687.1-201ENST00000605304 619 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AL451074.6-201ENST00000608512 729 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 AL160394.1-201ENST00000624765 724 ntBASIC1.77□□□□□ -2.13
ABCA1O95477 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ABCA1O95477 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ABCA1O95477 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 AL157700.1-201ENST00000561973 1432 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 RNA5SP456-201ENST00000364002 114 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCA1O95477 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCA1O95477 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.76□□□□□ -2.13
ABCA1O95477 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.76□□□□□ -2.13
ABCA1O95477 Z82205.1-201ENST00000428456 297 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 ATP5F1P1-201ENST00000433775 569 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.76□□□□□ -2.13
ABCA1O95477 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCA1O95477 MTND2P8-201ENST00000450555 1025 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCA1O95477 CFTRP1-201ENST00000456646 183 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.76□□□□□ -2.13
ABCA1O95477 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 RNA5SP402-201ENST00000517148 110 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.76□□□□□ -2.13
ABCA1O95477 AC234775.3-201ENST00000564612 656 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.76□□□□□ -2.13
ABCA1O95477 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ABCA1O95477 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.76□□□□□ -2.13
ABCA1O95477 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
ABCA1O95477 AL136164.4-201ENST00000625013 2135 ntBASIC1.76□□□□□ -2.13
ABCA1O95477 DYNLT3P1-201ENST00000378574 347 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 NPM1P10-201ENST00000398310 865 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 SPA17P1-201ENST00000416656 452 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 AL353729.1-201ENST00000425044 720 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC108667.1-201ENST00000428618 249 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC104472.2-201ENST00000469035 601 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 SNORA31.15-201ENST00000516771 132 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC025881.1-201ENST00000518851 512 ntBASIC1.75□□□□□ -2.13
ABCA1O95477 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA1O95477 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms