Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC107934.1-201ENST00000522215 217 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AP003034.1-201ENST00000534621 422 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AL157687.1-201ENST00000554853 619 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS4BO75351 MIR548S-201ENST00000581352 82 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 IPO5P1-202ENST00000600039 287 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC008277.2-201ENST00000605196 797 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 AC067931.1-201ENST00000624190 671 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 AL139811.1-201ENST00000424779 2299 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS4BO75351 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS4BO75351 AC025031.4-201ENST00000621248 3271 ntBASIC4.33□□□□□ -1.72
VPS4BO75351 AC011460.1-201ENST00000636268 1834 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS4BO75351 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 Y_RNA.1-201ENST00000352915 104 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 RNU5E-1-201ENST00000362477 120 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 RNU6-181P-201ENST00000363225 107 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 RNU6-97P-201ENST00000363387 104 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 RPS26P8-201ENST00000393490 348 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 MRPL42P2-201ENST00000403169 426 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AL160275.2-201ENST00000412010 394 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS4BO75351 RPS23P10-201ENST00000416185 486 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 AL451062.2-201ENST00000427515 271 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 DPPA2P1-201ENST00000428060 556 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC073464.1-201ENST00000429823 534 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS4BO75351 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 Z95327.1-201ENST00000446082 482 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 FABP3P2-201ENST00000453169 399 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC027673.1-201ENST00000456245 405 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS4BO75351 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 SNORA84-201ENST00000459229 133 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC034236.1-201ENST00000469891 373 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 RPL35P6-201ENST00000490024 372 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 COX7A2P2-201ENST00000505291 250 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS4BO75351 RNA5SP154-201ENST00000516193 111 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 RNU6-445P-201ENST00000516949 107 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 IGKV2D-36-201ENST00000518643 226 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AL161713.1-201ENST00000555538 145 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC084783.1-201ENST00000565846 910 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC099489.2-201ENST00000574976 260 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 MIR3167-201ENST00000579623 85 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC068790.5-201ENST00000602741 355 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC121334.2-201ENST00000605387 271 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 Z98200.1-201ENST00000607298 470 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 AC079597.1-201ENST00000624306 508 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 MIR4496-201ENST00000635896 61 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
VPS4BO75351 AC011266.1-201ENST00000624119 3569 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 FAM91A3P-201ENST00000456826 2544 ntBASIC4.32□□□□□ -1.72
VPS4BO75351 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS4BO75351 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS4BO75351 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS4BO75351 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 AC138915.3-201ENST00000562908 1389 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS4BO75351 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 RNA5SP52-201ENST00000362448 134 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 RNU6-282P-201ENST00000365357 103 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 Y_RNA.402-201ENST00000383972 102 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 SNORD51-201ENST00000384320 80 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VPS4BO75351 RNU6-780P-201ENST00000391030 104 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS4BO75351 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VPS4BO75351 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS4BO75351 HMGB3P20-201ENST00000417997 600 ntBASIC4.31□□□□□ -1.72
VPS4BO75351 CYP4F29P-201ENST00000420685 446 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms