Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LCMT2O60294 GDI2P1-201ENST00000429312 1336 ntBASIC3.17□□□□□ -1.9
LCMT2O60294 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
LCMT2O60294 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.16□□□□□ -1.9
LCMT2O60294 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LCMT2O60294 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 SNRPEP3-201ENST00000338402 276 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 RNU6-216P-201ENST00000363282 104 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC063979.1-201ENST00000415539 377 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC099677.1-201ENST00000420575 175 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 UBE2D3P2-201ENST00000424409 445 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.16□□□□□ -1.9
LCMT2O60294 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.16□□□□□ -1.9
LCMT2O60294 PRSS3P4-201ENST00000453323 162 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC104308.1-201ENST00000454621 333 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 RPL23AP31-201ENST00000456160 467 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 AC091153.1-201ENST00000466297 402 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC034236.1-201ENST00000469891 373 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC087312.1-201ENST00000471411 480 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 RN7SL442P-201ENST00000473804 320 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 KLRA1P-201ENST00000503499 986 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.16□□□□□ -1.9
LCMT2O60294 AC006390.1-201ENST00000508068 283 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.16□□□□□ -1.9
LCMT2O60294 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.16□□□□□ -1.9
LCMT2O60294 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 AC011602.1-201ENST00000546484 331 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.16□□□□□ -1.9
LCMT2O60294 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.16□□□□□ -1.9
LCMT2O60294 DUXAP3-201ENST00000603616 594 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC024220.1-201ENST00000603675 484 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC068831.7-201ENST00000616954 363 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LCMT2O60294 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.16□□□□□ -1.9
LCMT2O60294 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LCMT2O60294 SGO1P2-201ENST00000429458 1589 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 Z83843.1-201ENST00000604070 3685 ntBASIC3.16□□□□□ -1.9
LCMT2O60294 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.16□□□□□ -1.9
LCMT2O60294 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.16□□□□□ -1.9
LCMT2O60294 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.15□□□□□ -1.9
LCMT2O60294 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.15□□□□□ -1.9
LCMT2O60294 AC002546.1-201ENST00000588041 2504 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LCMT2O60294 OR5H2-201ENST00000355273 945 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LCMT2O60294 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 MIR506-201ENST00000384998 124 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 MIR513B-201ENST00000385136 84 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LCMT2O60294 SNRPEP2-201ENST00000397592 279 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 MTCO2P17-201ENST00000424336 677 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 AL451062.2-201ENST00000427515 271 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 ATP5F1P1-201ENST00000433775 569 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 BX679664.1-201ENST00000434429 253 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 MTND4LP10-201ENST00000435146 291 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC010401.1-201ENST00000463867 348 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 HMGN2P13-201ENST00000476476 274 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 HMGB1P28-201ENST00000507778 552 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 RNY4P37-201ENST00000516225 96 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 AC018630.1-201ENST00000541376 925 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.15□□□□□ -1.91
LCMT2O60294 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.15□□□□□ -1.91
LCMT2O60294 HIGD1AP17-201ENST00000554576 276 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 FAM60BP-201ENST00000578364 658 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.15□□□□□ -1.91
LCMT2O60294 BNIP3P22-201ENST00000593399 556 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 BDH2P1-201ENST00000602288 736 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC091057.2-201ENST00000602594 792 ntBASIC3.15□□□□□ -1.91
LCMT2O60294 AC013470.4-201ENST00000619978 986 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms