Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 RPS4XP10-201ENST00000465034 731 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC091153.1-201ENST00000466297 402 ntBASIC2.93□□□□□ -1.94
LSM1O15116 RPL30P14-201ENST00000482744 348 ntBASIC2.93□□□□□ -1.94
LSM1O15116 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
LSM1O15116 KLRA1P-201ENST00000503499 986 ntBASIC2.93□□□□□ -1.94
LSM1O15116 DSTNP2-201ENST00000504533 515 ntBASIC2.93□□□□□ -1.94
LSM1O15116 SEM1P1-201ENST00000506694 209 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 OR5AK1P-201ENST00000524837 922 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AP001804.3-201ENST00000525146 880 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 AC019159.1-201ENST00000605094 187 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AP005137.2-201ENST00000609238 400 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.93□□□□□ -1.94
LSM1O15116 AC018692.3-201ENST00000623929 123 ntBASIC2.93□□□□□ -1.94
LSM1O15116 AC080188.3-201ENST00000624842 748 ntBASIC2.93□□□□□ -1.94
LSM1O15116 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 CYP3A51P-201ENST00000633513 256 ntBASIC2.93□□□□□ -1.94
LSM1O15116 MIR622-201ENST00000638396 96 ntBASIC2.93□□□□□ -1.94
LSM1O15116 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
LSM1O15116 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LSM1O15116 AC011460.1-201ENST00000636268 1834 ntBASIC2.93□□□□□ -1.94
LSM1O15116 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LSM1O15116 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.93□□□□□ -1.94
LSM1O15116 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.93□□□□□ -1.94
LSM1O15116 AC091564.4-201ENST00000533934 2194 ntBASIC2.93□□□□□ -1.94
LSM1O15116 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
LSM1O15116 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LSM1O15116 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LSM1O15116 MIR183-201ENST00000384958 110 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AL133264.1-201ENST00000407157 562 ntBASIC2.92□□□□□ -1.94
LSM1O15116 RN7SKP220-201ENST00000410611 288 ntBASIC2.92□□□□□ -1.94
LSM1O15116 RNU4-47P-201ENST00000410876 114 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC004866.2-201ENST00000438285 481 ntBASIC2.92□□□□□ -1.94
LSM1O15116 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM1O15116 RPL32P34-201ENST00000486380 400 ntBASIC2.92□□□□□ -1.94
LSM1O15116 RPL7P23-201ENST00000493874 747 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.92□□□□□ -1.94
LSM1O15116 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.92□□□□□ -1.94
LSM1O15116 DUXAP2-201ENST00000519198 589 ntBASIC2.92□□□□□ -1.94
LSM1O15116 UBL5P2-201ENST00000583788 219 ntBASIC2.92□□□□□ -1.94
LSM1O15116 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM1O15116 AC005776.1-201ENST00000603164 290 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC245389.1-201ENST00000605141 529 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC091946.2-201ENST00000606105 291 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC106028.5-201ENST00000610332 395 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AL161637.1-201ENST00000622380 412 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AC099506.2-201ENST00000623074 221 ntBASIC2.92□□□□□ -1.94
LSM1O15116 U6.105-201ENST00000637379 88 ntBASIC2.92□□□□□ -1.94
LSM1O15116 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
LSM1O15116 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.92□□□□□ -1.94
LSM1O15116 AL512283.1-201ENST00000606756 1384 ntBASIC2.91□□□□□ -1.94
LSM1O15116 NACA3P-201ENST00000359690 648 ntBASIC2.91□□□□□ -1.94
LSM1O15116 RNU5D-1-201ENST00000363299 116 ntBASIC2.91□□□□□ -1.94
LSM1O15116 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM1O15116 RNU6-657P-201ENST00000383904 107 ntBASIC2.91□□□□□ -1.94
LSM1O15116 RPS4XP3-201ENST00000398541 413 ntBASIC2.91□□□□□ -1.94
LSM1O15116 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.91□□□□□ -1.94
LSM1O15116 MTCYBP32-201ENST00000427945 1084 ntBASIC2.91□□□□□ -1.94
LSM1O15116 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 AL512637.2-201ENST00000431287 1256 ntBASIC2.91□□□□□ -1.94
LSM1O15116 RPL17P35-201ENST00000432217 549 ntBASIC2.91□□□□□ -1.94
LSM1O15116 MUPP-201ENST00000438111 566 ntBASIC2.91□□□□□ -1.94
LSM1O15116 COX6CP18-201ENST00000448769 222 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 Z82190.1-201ENST00000454534 490 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 SNORA70.16-201ENST00000516390 95 ntBASIC2.91□□□□□ -1.94
LSM1O15116 SNORA67.7-201ENST00000516664 135 ntBASIC2.91□□□□□ -1.94
LSM1O15116 SNORA48.10-201ENST00000516965 160 ntBASIC2.91□□□□□ -1.94
LSM1O15116 FAM60DP-201ENST00000524174 632 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.91□□□□□ -1.94
LSM1O15116 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LSM1O15116 LARP7P2-201ENST00000575306 125 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.91□□□□□ -1.94
LSM1O15116 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.91□□□□□ -1.94
LSM1O15116 AC012443.1-201ENST00000605605 231 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC2.91□□□□□ -1.94
LSM1O15116 AC006133.1-201ENST00000617106 264 ntBASIC2.91□□□□□ -1.94
LSM1O15116 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
LSM1O15116 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.91□□□□□ -1.94
LSM1O15116 MTCO1P12-201ENST00000414273 1543 ntBASIC2.91□□□□□ -1.94
LSM1O15116 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
LSM1O15116 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
LSM1O15116 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
LSM1O15116 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.9□□□□□ -1.94
LSM1O15116 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
LSM1O15116 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
LSM1O15116 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LSM1O15116 SUGT1P1-201ENST00000379514 476 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms