Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATP2A1O14983 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.95□□□□□ -1.78
ATP2A1O14983 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
ATP2A1O14983 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATP2A1O14983 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ATP2A1O14983 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.95□□□□□ -1.78
ATP2A1O14983 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ATP2A1O14983 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ATP2A1O14983 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.95□□□□□ -1.78
ATP2A1O14983 Z83843.1-201ENST00000604070 3685 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATP2A1O14983 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
ATP2A1O14983 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ATP2A1O14983 SNORA38.1-201ENST00000364172 131 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 RNVU1-3-201ENST00000364313 161 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 SNORD116-8-201ENST00000384365 95 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 MIR1183-201ENST00000408856 89 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AL365203.2-201ENST00000423444 196 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AC234781.2-201ENST00000426370 994 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AL035407.1-201ENST00000429211 571 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.94□□□□□ -1.78
ATP2A1O14983 RPL23AP33-201ENST00000442301 452 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AL590399.6-201ENST00000446396 307 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 USP9YP34-201ENST00000453983 808 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ATP2A1O14983 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.94□□□□□ -1.78
ATP2A1O14983 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AC104685.1-201ENST00000502445 371 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.94□□□□□ -1.78
ATP2A1O14983 TMEM251P1-201ENST00000503717 318 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 PTGES3P3-201ENST00000511479 482 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 CKS1BP3-201ENST00000600888 237 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AL596327.1-201ENST00000603629 213 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AP000676.3-201ENST00000623299 569 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AC079248.2-201ENST00000623779 326 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AC127502.3-201ENST00000636170 1206 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 OTUD4P1-201ENST00000237841 3067 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATP2A1O14983 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
ATP2A1O14983 AC032011.1-201ENST00000611703 1549 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 AP002907.1-201ENST00000606361 1430 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.94□□□□□ -1.78
ATP2A1O14983 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
ATP2A1O14983 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
ATP2A1O14983 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AC058791.1-201ENST00000608412 3198 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
ATP2A1O14983 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATP2A1O14983 MIR423-201ENST00000362201 94 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 RNU6-374P-201ENST00000364146 108 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 RNU6-253P-201ENST00000384730 105 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 RHEBP3-201ENST00000411920 351 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 BX323014.1-201ENST00000412876 237 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC093698.1-201ENST00000423843 571 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC005517.2-201ENST00000424673 553 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 HMGN2P7-201ENST00000456186 273 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 RPS29P2-201ENST00000479278 136 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.93□□□□□ -1.78
ATP2A1O14983 HSPE1P23-201ENST00000509838 286 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ATP2A1O14983 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC118465.1-201ENST00000513820 1271 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AC026333.2-201ENST00000542164 106 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATP2A1O14983 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AC090616.2-202ENST00000584248 222 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 MAGOH2P-202ENST00000584384 429 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC067852.3-201ENST00000589177 561 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC012493.2-201ENST00000595083 291 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC007687.1-201ENST00000602704 304 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AP000811.1-201ENST00000603803 651 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC018714.1-201ENST00000605028 208 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 AC080013.4-201ENST00000607624 649 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.93□□□□□ -1.78
ATP2A1O14983 AC025588.4-201ENST00000615802 908 ntBASIC3.93□□□□□ -1.78
ATP2A1O14983 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
ATP2A1O14983 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATP2A1O14983 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms