Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00888-204ENST00000487386 421 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 MLLT10P2-201ENST00000506434 249 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC096571.1-202ENST00000506634 735 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 RN7SKP96-201ENST00000516948 297 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AP005902.1-201ENST00000521358 186 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 COX6B1P6-201ENST00000522347 255 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AL450336.1-201ENST00000605180 586 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC012557.1-201ENST00000607115 611 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC135507.1-201ENST00000607214 561 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC092954.1-201ENST00000609121 445 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AL161423.1-201ENST00000613700 262 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC109809.1-201ENST00000619665 545 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 AC027309.3-201ENST00000623419 351 ntBASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.26□□□□□ -2.21
CHKB-CPT1BH3BT56 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC104446.1-201ENST00000613728 1321 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 ANKRD36P1-201ENST00000344424 659 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RN7SKP226-201ENST00000364912 300 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-452P-201ENST00000384406 107 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AL122016.1-201ENST00000403365 367 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 GSTA9P-201ENST00000406231 611 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AL445685.2-201ENST00000422551 342 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC098614.2-201ENST00000426040 255 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 OR6C71P-201ENST00000432580 913 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL23AP83-201ENST00000434984 473 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 ARPC3P1-201ENST00000437218 533 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC023512.1-201ENST00000444513 499 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RPS15AP27-201ENST00000449183 343 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC025033.1-201ENST00000463883 194 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 RNF138P1-201ENST00000502765 546 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC018630.1-201ENST00000541376 925 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 OR4K7P-201ENST00000580232 945 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 DUXAP9-208ENST00000622815 614 ntBASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 WDR75-207ENST00000631047 270 ntTSL 5 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CHKB-CPT1BH3BT56 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR21-201ENST00000362134 72 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6-989P-201ENST00000362756 107 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RNA5SP68-201ENST00000363885 119 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 MIR767-201ENST00000390228 109 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 HMGB3P31-201ENST00000413333 595 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL158825.1-201ENST00000414735 521 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC01881-201ENST00000416103 412 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC245028.1-201ENST00000423259 256 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC091390.3-201ENST00000426478 338 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL7L1P10-201ENST00000427790 463 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 MTCYBP3-201ENST00000445588 1137 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 UBE2V2P4-201ENST00000447495 259 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL136380.1-201ENST00000447970 162 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AL021397.1-201ENST00000451806 248 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 TSACC-207ENST00000470342 601 ntTSL 2 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RPL23AP41-201ENST00000484754 458 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC023141.11-201ENST00000508864 202 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC1.24□□□□□ -2.21
CHKB-CPT1BH3BT56 OR8R1P-201ENST00000543943 764 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms