Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 SNORA62.2-201ENST00000364672 152 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 MIR181B1-201ENST00000385240 110 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RNU6-328P-201ENST00000390887 106 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 SEC63P1-201ENST00000425785 1258 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC244505.4-201ENST00000434905 287 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RPS7P5-201ENST00000441482 581 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 SSXP5-201ENST00000443473 287 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 MOB1AP2-201ENST00000446060 614 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 OR6C72P-201ENST00000451403 892 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC243772.1-201ENST00000451620 410 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC011352.3-201ENST00000505162 593 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RNA5SP182-201ENST00000516064 82 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 ADAM3B-201ENST00000569937 840 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RNU6-386P-201ENST00000362650 107 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC106901.1-201ENST00000425086 698 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MTND4LP16-201ENST00000440828 295 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RNU4-18P-201ENST00000516751 149 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MTND2P13-201ENST00000577438 1039 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MIR4303-201ENST00000581299 66 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MIR4452-201ENST00000583004 71 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RNA5SP105-201ENST00000391123 113 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 HMGB1P10-201ENST00000395823 563 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RPL23AP39-201ENST00000415533 405 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RPS15AP12-201ENST00000419498 388 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL049830.2-201ENST00000480072 201 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MTCO3P42-201ENST00000509488 518 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 MTCO3P39-201ENST00000514812 518 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 SNORD116-26-201ENST00000516006 96 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RN7SKP34-201ENST00000516142 244 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RNU6-551P-201ENST00000516661 103 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AL354943.1-201ENST00000572103 781 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 RPAP2P1-201ENST00000603626 1168 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 AC244517.12-201ENST00000623581 663 ntBASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL6A6A6NMZ7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 SNORD65-201ENST00000391079 73 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 SDCBPP3-201ENST00000419629 891 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL353597.2-202ENST00000434901 373 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 C1DP3-201ENST00000455013 423 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 HMGB1P41-201ENST00000520234 440 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL592494.3-201ENST00000609485 464 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 MTND5P27-201ENST00000428871 1720 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AC008432.1-201ENST00000615912 1320 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AL513175.2-201ENST00000422071 443 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 MTCO1P57-201ENST00000432182 261 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 XKRYP6-201ENST00000440468 1116 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 XKRYP3-201ENST00000442113 1116 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 OR4R2P-201ENST00000530815 597 ntBASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A6A6NMZ7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms