Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AC009902.3-201ENST00000606235 2172 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AL136295.6-201ENST00000610486 658 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 AL158801.5-201ENST00000623123 465 ntBASIC1.36□□□□□ -2.19
LINC01549A6NIU2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 SNORA16.1-201ENST00000364597 132 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AL023807.1-201ENST00000407932 359 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AL512504.1-201ENST00000415494 778 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC027124.2-201ENST00000428249 105 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RPL7P18-201ENST00000478965 734 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RPL21P99-201ENST00000480369 423 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RPL23AP70-201ENST00000483361 460 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RPS15AP34-201ENST00000487776 387 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 HMGB1P38-201ENST00000490557 577 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 HMGB3P17-201ENST00000504195 649 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC002456.2-201ENST00000509356 380 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RN7SKP132-201ENST00000516001 208 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RNA5SP468-201ENST00000516782 93 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 SNORA31.23-201ENST00000517219 133 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 IGKV3-31-201ENST00000523109 329 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 CIR1P1-201ENST00000524055 1133 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 OR4V1P-201ENST00000525394 1140 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AL096840.1-201ENST00000603287 93 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 SRGNP1-201ENST00000603392 451 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AL110115.1-201ENST00000614396 364 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AC244517.12-201ENST00000623581 663 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 RPL23AP61-201ENST00000623642 466 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LINC01549A6NIU2 AP001350.1-201ENST00000601906 1524 ntBASIC1.35□□□□□ -2.19
LINC01549A6NIU2 MTND4P27-201ENST00000450813 1354 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC022336.2-201ENST00000568966 2538 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 RNU4-7P-201ENST00000364758 141 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 XGY1-201ENST00000381172 446 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 BTF3P7-201ENST00000407097 488 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 RPL7P37-201ENST00000425095 738 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 MTCO1P39-201ENST00000426148 480 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 PSPHP1-201ENST00000450062 261 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 ATG12P2-201ENST00000456830 416 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 FAM172BP-201ENST00000487497 1089 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 OR4G11P-201ENST00000492842 939 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC080014.1-201ENST00000496877 1201 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC097462.2-201ENST00000504623 481 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 RNU6-1073P-201ENST00000517182 106 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 ERHP1-201ENST00000523006 310 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AP001646.1-201ENST00000527936 915 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC009063.1-201ENST00000563342 702 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 VN1R92P-201ENST00000598511 928 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 U73023.1-201ENST00000603134 700 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 HMGN2P28-201ENST00000606102 262 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 MIR6873-201ENST00000622788 63 ntBASIC1.34□□□□□ -2.19
LINC01549A6NIU2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01549A6NIU2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.34□□□□□ -2.2
LINC01549A6NIU2 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL390862.1-201ENST00000635467 1469 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 RNU6-335P-201ENST00000364563 113 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC016769.2-201ENST00000414815 475 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 RPL31P63-201ENST00000422565 375 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL356320.1-201ENST00000429616 163 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 RPL7P12-201ENST00000446719 750 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC104978.1-201ENST00000449387 391 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AC093755.1-201ENST00000512950 1023 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 HMGB1P46-201ENST00000520062 610 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 CYCSP26-201ENST00000534107 320 ntBASIC1.33□□□□□ -2.2
LINC01549A6NIU2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LINC01549A6NIU2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms