Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AL670379.9-201ENST00000605428 253 ntBASIC6.11□□□□□ -1.43
USP17L4A6NCW7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 AL138960.1-201ENST00000613838 513 ntBASIC6.11□□□□□ -1.43
USP17L4A6NCW7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
USP17L4A6NCW7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC099654.2-201ENST00000433031 1980 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RNU6-146P-201ENST00000384602 108 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RNU6-1106P-201ENST00000390845 107 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RNA5SP219-201ENST00000390940 113 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RNU2-47P-201ENST00000410649 186 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 UBE2FP1-201ENST00000416536 447 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RPL21P112-201ENST00000434403 463 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 MED28P3-201ENST00000444288 531 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC116533.1-201ENST00000459748 321 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RN7SL385P-201ENST00000468873 276 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RN7SL814P-201ENST00000487715 300 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 RN7SKP295-201ENST00000517264 153 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 CR383656.7-201ENST00000548164 174 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AL031176.1-201ENST00000604554 466 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC012409.4-201ENST00000612923 249 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 SNHG22-203ENST00000617833 660 ntBASIC6.1□□□□□ -1.43
USP17L4A6NCW7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USP17L4A6NCW7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 RNA5SP453-201ENST00000362503 119 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 RNU6-593P-201ENST00000364716 112 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SNORD116-11-201ENST00000383882 92 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 Y_RNA.401-201ENST00000383965 117 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 CISD1P1-201ENST00000393907 327 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AL590609.2-201ENST00000421430 368 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 RPL31P12-201ENST00000422587 358 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC093106.2-201ENST00000428212 385 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC008065.1-201ENST00000428525 348 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SNAP23P1-201ENST00000433229 246 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC093414.1-201ENST00000434712 514 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AL353597.2-202ENST00000434901 373 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SNRPEP4-201ENST00000435815 279 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 OR1H1P-201ENST00000448731 937 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC090804.1-201ENST00000448870 490 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 TPT1P12-201ENST00000448968 492 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 RPS15AP27-201ENST00000449183 343 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 MTCO3P10-201ENST00000455912 772 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 MIR4716-201ENST00000579628 84 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 MIR7853-201ENST00000584820 132 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AC020910.3-201ENST00000603701 874 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 AL359893.1-201ENST00000447628 1580 ntBASIC6.09□□□□□ -1.43
USP17L4A6NCW7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.09□□□□□ -1.43
USP17L4A6NCW7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USP17L4A6NCW7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
USP17L4A6NCW7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms