Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC090022.1-201ENST00000546569 311 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AL669831.4-202ENST00000590817 238 ntBASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SHISA3A0PJX4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL360270.2-201ENST00000562952 5985 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 COX6B1P3-201ENST00000312310 260 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RNA5SP273-201ENST00000362484 113 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 SNORD62.1-201ENST00000362541 86 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.428-201ENST00000384078 102 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 SNORA16A-201ENST00000384342 137 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MT-TR-201ENST00000387439 65 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RPS3AP2-201ENST00000407190 754 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 SNORA11.3-201ENST00000408471 128 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 Z99755.1-201ENST00000414048 380 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC092447.6-201ENST00000414578 210 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL590632.1-201ENST00000424289 371 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 CYCSP43-201ENST00000438233 310 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 ATP5LP2-201ENST00000440646 311 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL359672.1-201ENST00000442302 409 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RPL7AP61-201ENST00000443410 636 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 TPT1P13-201ENST00000449760 499 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 GSTA11P-201ENST00000452866 669 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RPS24P16-201ENST00000497294 392 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 RNU6-677P-201ENST00000516914 101 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.721-201ENST00000517207 102 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC009812.2-201ENST00000517657 457 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC026371.1-201ENST00000551867 419 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC006349.1-201ENST00000555526 235 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MYL12BP1-201ENST00000569826 507 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC104763.2-201ENST00000604179 382 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC011626.1-201ENST00000604710 562 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 FAM27E4-201ENST00000605259 342 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AL158032.1-201ENST00000605401 106 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC004696.1-201ENST00000614345 607 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 SNORA11.6-201ENST00000619030 128 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 AC092747.4-201ENST00000620519 1861 ntBASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SHISA3A0PJX4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 STX3-208ENST00000641815 3236 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC074029.4-201ENST00000624796 1859 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNU1-19P-201ENST00000363306 165 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNA5SP131-201ENST00000365452 119 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 SET-203ENST00000372688 801 ntTSL 2 BASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNU6-214P-201ENST00000384130 107 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 Y_RNA.496-201ENST00000384444 101 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 RNU6-95P-201ENST00000384697 107 ntBASIC4.67□□□□□ -1.66
SHISA3A0PJX4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms