Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORA31.8-201ENST00000516327 108 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP309-201ENST00000516670 106 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AP003181.2-201ENST00000528941 181 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR4528-201ENST00000577763 90 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 IPO5P1-202ENST00000600039 287 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AC072046.2-201ENST00000618366 268 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL445567.2-201ENST00000618935 498 ntBASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
COL4A3BPQ9Y5P4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL133243.3-201ENST00000617415 3004 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 DEFB108F-201ENST00000344638 222 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP175-201ENST00000364275 119 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 MTCO3P41-201ENST00000414801 328 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 EIF1P3-201ENST00000423841 334 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC137499.1-201ENST00000427602 88 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 ARPC3P1-201ENST00000437218 533 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 MTCO2P29-201ENST00000465212 189 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 RPS26P28-201ENST00000470806 348 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 UQCRHP4-201ENST00000471686 272 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC092451.1-201ENST00000480211 153 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC041039.1-201ENST00000485656 536 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC091167.1-201ENST00000492017 396 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 RPS15AP36-201ENST00000492022 382 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC104164.2-201ENST00000496953 495 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC107934.1-201ENST00000522215 217 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC007599.1-201ENST00000568688 1174 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR3118-1-201ENST00000581787 76 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL589743.7-201ENST00000612637 233 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL359715.5-201ENST00000623431 443 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC048347.1-201ENST00000624621 427 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AC110994.2-201ENST00000635481 492 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 AL158163.1-201ENST00000603915 1649 ntBASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
COL4A3BPQ9Y5P4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU1-15P-201ENST00000353977 144 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNY4P16-201ENST00000364768 94 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL23AP32-201ENST00000395315 459 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL603766.1-201ENST00000407763 664 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU2-37P-201ENST00000410695 177 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 HMGB3P23-201ENST00000414981 585 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 C1DP2-201ENST00000418167 426 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RPS15AP12-201ENST00000419498 388 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC019097.1-201ENST00000424783 735 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL589872.1-201ENST00000426602 288 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 NUTF2P3-201ENST00000448540 384 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC103987.1-201ENST00000473394 348 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC068587.1-201ENST00000483613 781 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC020893.1-201ENST00000502452 580 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU6-405P-201ENST00000516637 110 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP468-201ENST00000516782 93 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU2-46P-201ENST00000517038 113 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU6-840P-201ENST00000517275 65 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC011979.2-201ENST00000527568 352 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 CYCSP29-201ENST00000533731 318 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms