Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC008945.1-201ENST00000505144 499 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC022868.1-201ENST00000517767 391 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MIR4302-201ENST00000638058 60 ntBASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HRH3Q9Y5N1 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 MIR335-201ENST00000362173 94 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 RNU1-76P-201ENST00000362903 159 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 RNU6-886P-201ENST00000384319 105 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 SNORD73A-201ENST00000386062 65 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 MIR1250-201ENST00000408098 113 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC245096.1-201ENST00000413104 546 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 RPL35AP3-201ENST00000414680 288 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 BX842559.1-201ENST00000419615 532 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 BX276092.4-201ENST00000452056 248 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 PPIAP21-201ENST00000464473 501 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 RPS17P5-201ENST00000498293 408 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 NDUFB4P9-201ENST00000511646 388 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 RN7SKP82-201ENST00000516786 223 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 IGKV2D-36-201ENST00000518643 226 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC018552.1-201ENST00000562099 811 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AMZ2P1-203ENST00000565833 850 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC011445.2-201ENST00000599274 173 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC006557.5-201ENST00000603126 811 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AC073410.2-201ENST00000603240 332 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 uc_338.26-201ENST00000612659 160 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 AP005432.1-201ENST00000580891 3485 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 BTBD10P1-201ENST00000549824 1352 ntBASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HRH3Q9Y5N1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AC006484.1-201ENST00000435086 1884 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.54-201ENST00000362766 105 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.65-201ENST00000362846 100 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 RNU6-371P-201ENST00000364283 108 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 Y_RNA.352-201ENST00000365439 102 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 RNU6-1203P-201ENST00000410703 110 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AC015977.1-201ENST00000418887 292 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AL354766.1-201ENST00000423396 542 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 UBE2D3P2-201ENST00000424409 445 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 RN7SL269P-201ENST00000467795 305 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 RN7SL174P-201ENST00000475578 289 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AC109329.1-201ENST00000518744 317 ntBASIC5.52□□□□□ -1.53
HRH3Q9Y5N1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms