Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC009643.1-201ENST00000532030 391 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC026826.3-201ENST00000561747 158 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC084783.1-201ENST00000565846 910 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR4273-201ENST00000582824 84 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC008507.3-201ENST00000585753 472 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC093227.2-201ENST00000589357 285 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AL096712.1-201ENST00000614561 159 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 U73479.1-201ENST00000618062 168 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR4272-201ENST00000635924 64 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 AC008669.1-201ENST00000565823 2178 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 EOGT-210ENST00000615922 1931 ntBASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PCDHGA11Q9Y5H2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-790P-201ENST00000384479 105 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 Y_RNA.515-201ENST00000384535 112 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL21P67-201ENST00000402896 478 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR548I3-201ENST00000408378 149 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR548I1-201ENST00000408810 149 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU4-78P-201ENST00000410940 126 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC108032.1-201ENST00000416706 207 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RPL21P2-201ENST00000440049 481 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 DAP3P1-201ENST00000441522 278 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 HSFY6P-201ENST00000445573 403 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MTCO3P8-201ENST00000453691 755 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC068228.1-201ENST00000461723 211 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC005165.2-201ENST00000466070 380 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RNA5SP228-201ENST00000516232 133 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP238-201ENST00000516483 249 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC012339.2-201ENST00000523996 453 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC104576.1-201ENST00000524225 88 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AP000889.1-201ENST00000530968 660 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC023157.2-201ENST00000540596 141 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 OR1M4P-201ENST00000589199 287 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC011626.1-201ENST00000604710 562 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR15A-201ENST00000607334 83 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR6809-201ENST00000612189 116 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MIR6793-201ENST00000612376 63 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC103858.2-201ENST00000621471 543 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC139769.1-204ENST00000472297 1931 ntBASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHGA11Q9Y5H2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 AP004607.3-201ENST00000530354 3915 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-263P-201ENST00000363811 107 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RN7SKP78-201ENST00000364711 318 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RNU6-1303P-201ENST00000364841 107 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 RNA5SP178-201ENST00000410380 128 ntBASIC5.62□□□□□ -1.51
PCDHGA11Q9Y5H2 BX276092.3-201ENST00000424182 230 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms