Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RNY1P16-201ENST00000363063 111 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RNY3P11-201ENST00000364153 102 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AC096921.1-201ENST00000411661 375 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AL590399.2-201ENST00000427536 309 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 TRBV5-2-201ENST00000489095 273 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 HMGB1P35-201ENST00000503360 598 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 SNORA70.11-201ENST00000515987 138 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 SNORA70.13-201ENST00000516116 138 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SKP288-201ENST00000516227 268 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-111P-201ENST00000517179 105 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 IGKV2D-23-201ENST00000518179 286 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 CBX3P8-201ENST00000532412 525 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AL589674.2-201ENST00000604304 337 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 AC130454.1-201ENST00000622948 401 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 IRF5P1-201ENST00000504852 2164 ntBASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB11Q9Y5F2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SKP128-201ENST00000364270 303 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 SNORA51.11-201ENST00000384442 131 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AL391361.1-201ENST00000405580 489 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AL030996.1-201ENST00000411430 235 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 RPS4XP5-201ENST00000419038 768 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 PIGPP3-201ENST00000425307 415 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 BX323845.3-201ENST00000428215 527 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC126120.1-201ENST00000431082 470 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 PPP1R11P1-201ENST00000486095 376 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SL284P-201ENST00000498823 275 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 TOMM22P4-201ENST00000511318 336 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SKP82-201ENST00000516786 223 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.700-201ENST00000516806 100 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC022080.3-201ENST00000544433 482 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC010547.6-201ENST00000571789 193 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 MIR5692A1-201ENST00000580523 69 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 AC026523.2-201ENST00000625039 7739 ntBASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB11Q9Y5F2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.48-201ENST00000362710 103 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RN7SKP162-201ENST00000363605 345 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-288P-201ENST00000363690 104 ntBASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB11Q9Y5F2 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms