Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RTCBQ9Y3I0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RTCBQ9Y3I0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RTCBQ9Y3I0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.02□□□□□ -1.45
RTCBQ9Y3I0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.22-201ENST00000362492 102 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.31-201ENST00000362574 102 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.187-201ENST00000363918 113 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.234-201ENST00000364409 97 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 RNY3P13-201ENST00000365542 102 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.414-201ENST00000384011 101 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 SNORA70C-201ENST00000384538 135 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 RNU6-903P-201ENST00000391270 109 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AL606923.1-201ENST00000406616 190 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 ARL5AP1-201ENST00000418991 388 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AL356387.2-201ENST00000422272 243 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 PMCHL1-202ENST00000423102 261 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 UBE2V1P13-201ENST00000436983 439 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 RN7SL303P-201ENST00000469773 251 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC083904.1-201ENST00000487828 231 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC005726.1-201ENST00000494679 427 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC093303.1-201ENST00000514549 295 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC022634.1-201ENST00000520765 532 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC027369.5-201ENST00000533838 755 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC090615.1-201ENST00000577519 154 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 RNF138P2-201ENST00000603490 592 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC114781.5-201ENST00000615297 108 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 U3.53-201ENST00000628922 216 ntBASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RTCBQ9Y3I0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6□□□□□ -1.45
RTCBQ9Y3I0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RTCBQ9Y3I0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RTCBQ9Y3I0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RTCBQ9Y3I0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNU6-552P-201ENST00000362869 119 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 U3.12-201ENST00000364498 214 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNU6-331P-201ENST00000384724 107 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 MIR23B-201ENST00000384832 97 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 MIR558-201ENST00000384920 94 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.605-201ENST00000410577 105 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 FTLP19-201ENST00000433300 394 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6□□□□□ -1.45
RTCBQ9Y3I0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC107399.1-201ENST00000451226 265 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNU7-182P-201ENST00000459009 62 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 RN7SL517P-201ENST00000462240 305 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 ENPP7P11-201ENST00000505915 627 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 Y_RNA.682-201ENST00000516457 100 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNU6-709P-201ENST00000517257 104 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNU6-988P-201ENST00000519081 107 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC011979.2-201ENST00000527568 352 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 OR5B10P-201ENST00000532869 642 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC063950.1-201ENST00000552036 308 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC011477.5-201ENST00000586571 259 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 7SK.7-201ENST00000603504 247 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 RNA5SP439-201ENST00000617595 124 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 ZYXP1-201ENST00000617638 118 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 uc_338.22-201ENST00000622722 187 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC007823.1-201ENST00000569932 1566 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 AC104118.1-201ENST00000607625 1589 ntBASIC6□□□□□ -1.45
RTCBQ9Y3I0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RTCBQ9Y3I0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms