Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC093534.1-201ENST00000504977 132 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC110768.1-201ENST00000509222 400 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC034159.1-201ENST00000513885 583 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 MTND5P4-201ENST00000514978 288 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RNU6-714P-201ENST00000516963 103 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RANP9-201ENST00000519957 271 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 CR383656.7-201ENST00000548164 174 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 RN7SL703P-201ENST00000578485 302 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC053481.4-201ENST00000583164 216 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 AL031176.1-201ENST00000604554 466 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LIMA1Q9UHB6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL672167.1-206ENST00000356293 943 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU6-500P-201ENST00000362349 107 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU6-600P-201ENST00000362524 99 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU6-660P-201ENST00000364566 109 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC007066.1-201ENST00000392902 381 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL137014.1-201ENST00000420490 1226 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AP000907.1-201ENST00000428428 510 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL590103.1-201ENST00000434488 307 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 MTCYBP39-201ENST00000437562 491 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL357552.1-201ENST00000445254 415 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 OR6K5P-201ENST00000447050 945 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RPS4XP2-201ENST00000458402 793 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC026402.1-201ENST00000513642 170 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU2-58P-201ENST00000516403 183 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 MIR2276-201ENST00000516886 89 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 OR5D17P-201ENST00000531492 978 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC090888.1-201ENST00000561335 1141 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL049634.3-201ENST00000604968 457 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL590282.1-201ENST00000610379 1136 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC083809.1-201ENST00000615051 472 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC022079.1-201ENST00000621546 602 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 PCMTD1P7-201ENST00000634506 357 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AC066616.2-201ENST00000559334 1481 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 AL645937.1-201ENST00000641739 1652 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 MFSD8-233ENST00000641482 4860 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
LIMA1Q9UHB6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC092447.10-201ENST00000620607 1652 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 RNU6-553P-201ENST00000364047 96 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 SNORA51.2-201ENST00000364595 132 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 SNORD3H-201ENST00000384486 214 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL590704.1-201ENST00000402856 794 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 HMGB1P11-201ENST00000413899 637 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 RSU1P2-202ENST00000437884 485 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 RPL30P6-201ENST00000475925 342 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AP001025.2-201ENST00000490908 477 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC106872.3-201ENST00000495104 446 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC005178.1-201ENST00000508392 440 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 POU5F1P7-201ENST00000508759 541 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 RNU6-759P-201ENST00000516740 103 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC068587.4-201ENST00000533893 186 ntBASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMA1Q9UHB6 AC007834.2-201ENST00000536310 343 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms