Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RSL24D1P3-201ENST00000449255 495 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AL139824.2-201ENST00000458731 1095 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 ST13P14-201ENST00000474095 734 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC009812.2-201ENST00000517657 457 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC022080.3-201ENST00000544433 482 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 LSM6P2-201ENST00000552208 177 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AP001542.2-201ENST00000593141 364 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AP002802.2-201ENST00000605877 235 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC007275.1-201ENST00000621243 671 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC010872.1-201ENST00000624225 675 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC009039.2-201ENST00000624524 529 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 MIR622-201ENST00000638396 96 ntBASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.65□□□□□ -1.83
CLIP2Q9UDT6 AC111188.2-201ENST00000529697 1387 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 FAM35CP-201ENST00000554755 2470 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RNU6-582P-201ENST00000362989 107 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RNU6-263P-201ENST00000363811 107 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 SNORA54-201ENST00000384281 123 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RNU6-339P-201ENST00000384310 107 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AL354719.1-201ENST00000406535 843 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RPL7P46-201ENST00000425129 740 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RPL35AP12-201ENST00000425362 338 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC016696.1-201ENST00000446949 318 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 NPM1P13-201ENST00000452663 865 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RPS24P6-201ENST00000452670 400 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 SCARNA1-201ENST00000517138 166 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC068339.2-201ENST00000534395 618 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC090888.2-201ENST00000559765 1144 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 MTATP6P24-201ENST00000576835 677 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 SNORD39.3-201ENST00000584451 71 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AL355812.1-201ENST00000603215 216 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC099785.1-201ENST00000605697 437 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC004832.5-201ENST00000608677 401 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC097478.2-201ENST00000610572 514 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AL512506.2-201ENST00000624472 458 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 AC130650.2-201ENST00000618736 2403 ntBASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
CLIP2Q9UDT6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RNU6-1257P-201ENST00000384625 110 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 SNORA46-201ENST00000384762 135 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 MIR122-201ENST00000385044 85 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RPL31P1-201ENST00000398116 372 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RPL7P27-201ENST00000403775 720 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 FCF1P2-201ENST00000415284 583 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 OR2AS1P-201ENST00000427827 319 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 UQCRHP3-201ENST00000451503 251 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 NDUFA5P7-201ENST00000452914 242 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 TRBV26-201ENST00000456572 344 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 GTF2IP9-201ENST00000502460 301 ntBASIC3.63□□□□□ -1.83
CLIP2Q9UDT6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms