Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC026801.2-201ENST00000515352 425 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AP001804.3-201ENST00000525146 880 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 GTF3AP2-201ENST00000557014 266 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 MIR3200-201ENST00000580767 85 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 GLUD1P4-201ENST00000590914 418 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AL160237.3-201ENST00000604114 1013 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC019159.1-201ENST00000605094 187 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AC005000.2-201ENST00000605468 310 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 AL137246.1-201ENST00000607072 977 ntBASIC2.43□□□□□ -2.02
VPS29Q9UBQ0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 RNU6-7-201ENST00000364784 107 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 RNU6-8-201ENST00000365467 107 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 DEFA7P-201ENST00000382676 285 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 SNORA1.3-201ENST00000384676 136 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC079780.1-201ENST00000428259 207 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 RAC1P5-201ENST00000512182 576 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 RNU6-488P-201ENST00000515918 99 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 OR10V3P-201ENST00000525712 725 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC128657.1-201ENST00000549459 145 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 CKS1BP1-201ENST00000555221 240 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL355812.1-201ENST00000603215 216 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC079610.2-201ENST00000604818 690 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC004775.1-201ENST00000607389 753 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL513477.2-201ENST00000607858 568 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL138880.2-201ENST00000616214 239 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC092608.2-201ENST00000624427 218 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AL356118.1-201ENST00000635272 1078 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC068620.4-201ENST00000636730 1182 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC099654.7-201ENST00000635788 2127 ntBASIC2.42□□□□□ -2.02
VPS29Q9UBQ0 AC006378.2-201ENST00000623178 2476 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 RNU2-52P-201ENST00000410680 190 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AL512504.1-201ENST00000415494 778 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 COTL1P1-201ENST00000422309 375 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 UBE2V1P5-201ENST00000440070 405 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 RPS4XP6-201ENST00000477670 797 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 MTCO1P31-201ENST00000506355 492 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC090136.1-201ENST00000520009 240 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 VN1R90P-201ENST00000595717 726 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AC090116.1-201ENST00000615679 446 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 AL109659.3-201ENST00000624985 950 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 CRYM-AS1-204ENST00000637983 556 ntBASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS29Q9UBQ0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
VPS29Q9UBQ0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 NACA3P-201ENST00000359690 648 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 RNVU1-3-201ENST00000364313 161 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL356057.2-201ENST00000403318 432 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 RNU6-272P-201ENST00000411028 104 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC096664.2-201ENST00000411843 406 ntBASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.4□□□□□ -2.03
VPS29Q9UBQ0 AL096701.2-201ENST00000416920 238 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms