Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AP004372.1-201ENST00000604842 844 ntBASIC2.71□□□□□ -1.98
PHRF1Q9P1Y6 AC091953.2-201ENST00000623979 160 ntBASIC2.71□□□□□ -1.98
PHRF1Q9P1Y6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 MIR499A-201ENST00000384903 122 ntBASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AL445685.2-201ENST00000422551 342 ntBASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AC233279.1-201ENST00000455300 423 ntBASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 AP001486.2-201ENST00000561652 5113 ntBASIC2.7□□□□□ -1.98
PHRF1Q9P1Y6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 RNA5SP270-201ENST00000411361 118 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AC089999.1-201ENST00000460336 374 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 OR52A4P-203ENST00000498233 1014 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AP000889.2-201ENST00000532684 490 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AC087241.2-201ENST00000535801 324 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AP000787.2-201ENST00000604432 568 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 AC092650.2-201ENST00000619984 902 ntBASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
PHRF1Q9P1Y6 ZNF271P-202ENST00000465539 1970 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 TAF9P1-201ENST00000445421 515 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC245517.4-201ENST00000448601 281 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 TAF9P2-201ENST00000454958 515 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 TBCAP3-201ENST00000512475 312 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC010265.1-201ENST00000513509 211 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AL353746.1-201ENST00000566293 6881 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 MIR378A-201ENST00000362177 66 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 RNU6-661P-201ENST00000362409 107 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 Y_RNA.540-201ENST00000384638 111 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 FABP5P13-201ENST00000452144 328 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 RPL7P5-201ENST00000471472 736 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC005840.1-201ENST00000498412 377 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AL359821.1-201ENST00000605519 182 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 AC131902.3-201ENST00000611767 581 ntBASIC2.68□□□□□ -1.98
PHRF1Q9P1Y6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 FAM35CP-201ENST00000554755 2470 ntBASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 AC017007.3-201ENST00000479865 435 ntBASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 AC025881.1-201ENST00000518851 512 ntBASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 AC107021.2-201ENST00000567714 2095 ntBASIC2.67□□□□□ -1.98
PHRF1Q9P1Y6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 U8.10-201ENST00000384260 133 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 BTBD10P2-201ENST00000404779 676 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 BTF3P4-201ENST00000418852 495 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 AC034268.2-201ENST00000571784 482 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 XIST_intron.1-201ENST00000619444 68 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 CR382285.2-201ENST00000624662 1495 ntBASIC2.66□□□□□ -1.98
PHRF1Q9P1Y6 RLIMP2-201ENST00000427891 1563 ntBASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 FGF7P8-201ENST00000402994 292 ntBASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 HMGB3P15-201ENST00000507326 574 ntBASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.65□□□□□ -1.98
PHRF1Q9P1Y6 SNORA40.18-201ENST00000391200 128 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 MTND4P13-201ENST00000402078 1023 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 U3.37-201ENST00000408528 213 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC013268.2-201ENST00000420753 337 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AL358453.1-201ENST00000422522 250 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 ATP5F1P1-201ENST00000433775 569 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 RN7SKP5-201ENST00000517045 272 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 RPAP2P1-201ENST00000603626 1168 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 AC004520.1-201ENST00000608362 1413 ntBASIC2.64□□□□□ -1.99
PHRF1Q9P1Y6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms