Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RNU6-989P-201ENST00000362756 107 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RNU6-282P-201ENST00000365357 103 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RNU6-356P-201ENST00000384140 107 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RPL7P60-201ENST00000397636 735 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SNORA3C-201ENST00000408792 125 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RPS12P10-201ENST00000427031 377 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 TIMM9P1-201ENST00000436122 256 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RPL7P28-201ENST00000437739 740 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL356535.1-201ENST00000440335 398 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 RPL23AP93-201ENST00000440847 484 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 CEACAMP6-201ENST00000452007 574 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC027673.1-201ENST00000456245 405 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC108059.3-201ENST00000456388 214 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC092989.1-201ENST00000481235 277 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC108145.1-201ENST00000503770 153 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AK3P4-201ENST00000504283 583 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 PGBD4P4-201ENST00000509673 613 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 Y_RNA.693-201ENST00000516641 110 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC109635.3-201ENST00000529536 185 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SUB1P2-201ENST00000556401 297 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 COX6CP3-201ENST00000580869 223 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL512782.1-201ENST00000603093 364 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL391646.1-201ENST00000603860 190 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC067959.1-201ENST00000604334 379 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC112230.1-201ENST00000604342 547 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC010680.4-201ENST00000605334 543 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AP001596.2-201ENST00000608410 312 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC004908.2-201ENST00000609090 574 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC064801.1-201ENST00000612025 407 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 uc_338.12-201ENST00000616344 181 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC006338.1-201ENST00000618453 749 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AC068870.2-201ENST00000620635 389 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 AL138713.1-201ENST00000624026 2130 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 ZNF137P-201ENST00000456718 1920 ntBASIC4.8□□□□□ -1.64
SPTLC3Q9NUV7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 RNU5A-8P-201ENST00000364102 114 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 RNY4P16-201ENST00000364768 94 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 BX510359.2-201ENST00000417920 305 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 RPS15AP12-201ENST00000419498 388 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 ELOCP4-201ENST00000420090 333 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC092832.1-201ENST00000422934 400 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 RAC1P7-201ENST00000445367 377 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 HMGB1P25-201ENST00000468402 607 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC025678.1-201ENST00000567861 338 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC002553.4-201ENST00000616896 331 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 AC112204.3-201ENST00000623822 332 ntBASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.79□□□□□ -1.64
SPTLC3Q9NUV7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 OR5J1P-201ENST00000313544 939 ntBASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SPTLC3Q9NUV7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms