Protein–RNA interactions for Protein: Q9NS15

LTBP3, Latent-transforming growth factor beta-binding protein 3, humanhuman

Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3Q9NS15 TMEM248P1-201ENST00000510579 951 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC016065.2-201ENST00000514530 444 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 RNA5SP519-201ENST00000516480 119 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC011979.2-201ENST00000527568 352 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC007424.1-203ENST00000554613 687 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC087477.6-201ENST00000559595 843 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AL138976.2-201ENST00000563989 694 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 MIR4716-201ENST00000579628 84 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 UBE2L4-201ENST00000587688 464 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC025588.3-201ENST00000604182 274 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC004853.1-201ENST00000604902 698 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 SNORA51-201ENST00000606420 132 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 RMST_3.1-201ENST00000611651 109 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC093838.1-201ENST00000613014 469 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC007546.1-201ENST00000619452 559 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AL445363.3-201ENST00000623080 671 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AL158801.5-201ENST00000623123 465 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AL159972.1-201ENST00000625150 448 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AC090229.1-201ENST00000590983 1609 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 AL592182.3-201ENST00000642132 3304 ntBASIC5.31□□□□□ -1.56
LTBP3Q9NS15 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBP3Q9NS15 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 RNA5SP119-201ENST00000362715 117 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 RNU6-223P-201ENST00000362830 107 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 Y_RNA.356-201ENST00000365475 113 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 SNORA9-201ENST00000384215 133 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC097374.1-203ENST00000400783 485 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 RPS20P15-201ENST00000412792 311 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 YME1L1P1-201ENST00000429435 297 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 ATP5JP1-201ENST00000431631 322 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 TIMM9P1-201ENST00000436122 256 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 MTND1P18-201ENST00000448191 573 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 EIF4A1P11-201ENST00000451239 222 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC108059.3-201ENST00000456388 214 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 RNU7-63P-201ENST00000459054 62 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 COX7A2P2-201ENST00000505291 250 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 RNA5SP73-201ENST00000516744 108 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 HSPE1P5-201ENST00000561489 272 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 CYCSP40-201ENST00000575927 294 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 MIR4512-201ENST00000583257 77 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL355812.1-201ENST00000603215 216 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC115621.1-201ENST00000604653 858 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AL356585.4-201ENST00000623078 1229 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 AC107068.1-201ENST00000563286 4218 ntBASIC5.3□□□□□ -1.56
LTBP3Q9NS15 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBP3Q9NS15 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 RNU6-845P-201ENST00000362578 103 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC068050.1-201ENST00000394891 380 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 RNU2-9P-201ENST00000410194 145 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 OR4F13P-201ENST00000428478 931 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 GOT2P5-201ENST00000433995 546 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AL356010.1-201ENST00000456364 102 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 SNORD121B-201ENST00000458838 81 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC021660.1-201ENST00000465006 554 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC117522.3-201ENST00000507974 584 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 RNA5SP401-201ENST00000515920 127 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.29□□□□□ -1.56
LTBP3Q9NS15 AC022790.1-201ENST00000522872 204 ntBASIC5.29□□□□□ -1.56
LTBP3Q9NS15 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms