Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HSFY6P-201ENST00000445573 403 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 HMGB3P21-201ENST00000452483 547 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 CACYBPP2-201ENST00000453625 678 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 ISCUP1-201ENST00000454451 448 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC233702.1-201ENST00000482905 502 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 SNORD60.2-201ENST00000516883 86 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC090572.1-201ENST00000519251 160 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 BTF3P12-201ENST00000519620 469 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 LSM3P2-201ENST00000551246 273 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL356432.3-201ENST00000568952 465 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 RN7SL176P-201ENST00000580352 264 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 MIR3158-1-201ENST00000583596 81 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL355472.4-201ENST00000610233 626 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 AL354950.2-201ENST00000617939 290 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 CR381572.1-201ENST00000625098 102 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 MIR492-201ENST00000638676 116 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 RIOK3P1-201ENST00000418778 1528 ntBASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PDLIM7Q9NR12 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC105074.1-201ENST00000623380 3095 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 Y_RNA.132-201ENST00000363421 102 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 RNU1-83P-201ENST00000363426 164 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 RNY4P16-201ENST00000364768 94 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MIR1-2-201ENST00000384961 85 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MIR670-201ENST00000390142 98 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AL022722.2-201ENST00000402519 180 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 RPS15AP12-201ENST00000419498 388 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 OR2AH1P-201ENST00000425717 928 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC011998.1-201ENST00000433403 117 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AL049734.2-201ENST00000441066 616 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AP1S2P1-201ENST00000457344 379 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 RN7SL98P-201ENST00000462271 300 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 HMGB1P21-201ENST00000502313 581 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC018797.3-201ENST00000513388 1241 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 PSMA2P1-201ENST00000526365 646 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AP003072.2-201ENST00000527756 676 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AP000827.1-201ENST00000527814 258 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MIR4444-1-201ENST00000581696 74 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MIR4444-2-201ENST00000584390 74 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AL353997.4-201ENST00000586196 166 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AL603758.1-201ENST00000618654 241 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC022106.2-201ENST00000620114 757 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 C2orf27A-204ENST00000623058 969 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AL356585.4-201ENST00000623078 1229 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC090617.10-201ENST00000624308 134 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MIR3653-201ENST00000625572 110 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 AC083843.2-201ENST00000568248 6253 ntBASIC5.11□□□□□ -1.59
PDLIM7Q9NR12 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDLIM7Q9NR12 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms