Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
USP29Q9HBJ7 AC097714.1-201ENST00000511272 1647 ntBASIC4.21□□□□□ -1.73
USP29Q9HBJ7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
USP29Q9HBJ7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MIR23B-201ENST00000384832 97 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MTCYBP5-201ENST00000423752 1135 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC007742.1-201ENST00000425789 329 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL035410.1-201ENST00000427409 427 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL590233.1-201ENST00000430017 456 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 COX6B1P7-201ENST00000430845 235 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 ELOCP26-201ENST00000436067 329 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RPL7P28-201ENST00000437739 740 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MTND6P13-201ENST00000443510 523 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MTND1P1-201ENST00000445453 368 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RPL36AP13-201ENST00000457490 317 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC022034.3-201ENST00000471393 478 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC126182.1-201ENST00000478134 357 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 TMED11P-201ENST00000479478 690 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RPL21P103-201ENST00000479921 488 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RPL7P24-201ENST00000493052 752 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RPL31P61-201ENST00000496160 376 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC112204.1-201ENST00000502591 103 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 NDUFB4P2-201ENST00000509515 391 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC012417.1-201ENST00000582307 1039 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC104662.1-201ENST00000604448 511 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RBM11P1-201ENST00000604951 799 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 RNU4-89P-201ENST00000607443 133 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC091965.4-201ENST00000607691 587 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AC008250.2-201ENST00000615261 205 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 U6atac.1-201ENST00000616025 117 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL773545.4-201ENST00000637262 310 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL513478.4-201ENST00000641636 310 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 AL049780.3-201ENST00000624612 1583 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.21□□□□□ -1.74
USP29Q9HBJ7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP29Q9HBJ7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC116667.1-201ENST00000604855 2072 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RNY4P24-201ENST00000362735 96 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RNA5SP322-201ENST00000363617 119 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RPS20P2-201ENST00000402520 389 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC004987.3-201ENST00000413879 771 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AL356095.1-201ENST00000417217 199 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC012065.2-201ENST00000421295 375 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC009961.2-201ENST00000435771 251 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 GAPDHP17-201ENST00000449858 1001 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RPL37P6-202ENST00000464216 403 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC104563.1-201ENST00000476147 376 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC011352.1-201ENST00000512300 793 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC093677.1-201ENST00000514414 678 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RN7SKP277-201ENST00000516895 283 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RN7SKP234-201ENST00000517173 224 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AP003467.2-201ENST00000520175 319 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC134698.4-201ENST00000523451 826 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 RPL21P5-201ENST00000554662 472 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 CENPUP2-201ENST00000555897 1186 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 TPMTP1-201ENST00000592307 737 ntBASIC4.2□□□□□ -1.74
USP29Q9HBJ7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.2□□□□□ -1.74
USP29Q9HBJ7 AL161729.4-201ENST00000604650 476 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms