Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MAPK10-373ENST00000641983 6772 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 RNA5SP399-201ENST00000364003 117 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SNORD116-9-201ENST00000384000 95 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SNORD116-3-201ENST00000384287 95 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SNORD116-7-201ENST00000384404 95 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SNORD116-5-201ENST00000384462 95 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL136372.1-201ENST00000403060 228 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL359704.1-201ENST00000411586 781 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 RPL17P12-201ENST00000413391 526 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SEPT2P1-201ENST00000419651 180 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL445669.1-201ENST00000426743 755 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC091862.1-201ENST00000438016 1100 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL359073.1-201ENST00000448036 403 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL122001.1-201ENST00000457027 370 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC006463.2-201ENST00000473326 348 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC068724.1-201ENST00000487100 792 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC068305.1-201ENST00000497406 726 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL391156.1-201ENST00000554965 554 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL031985.2-201ENST00000600955 480 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AP000403.1-201ENST00000603349 851 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC110741.2-201ENST00000605278 268 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AC092653.1-201ENST00000608509 531 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 AL159972.1-201ENST00000625150 448 ntBASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
BRF2Q9HAW0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AP002001.2-201ENST00000529025 1469 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 Y_RNA.97-201ENST00000363094 102 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RNU4-40P-201ENST00000364351 143 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RNU4-65P-201ENST00000410473 140 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 SSXP9-201ENST00000417503 292 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC244035.1-201ENST00000430042 390 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RPL35AP22-201ENST00000436855 335 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RPL22P17-201ENST00000438729 315 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RAC1P7-201ENST00000445367 377 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AL500522.2-201ENST00000448562 343 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RPS11P1-201ENST00000451072 473 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 MTCO1P42-201ENST00000457379 726 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 OR9M1P-201ENST00000459641 921 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AP000797.1-201ENST00000478870 387 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC091965.2-201ENST00000512324 613 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 SNORA31.8-201ENST00000516327 108 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RN7SKP289-201ENST00000517244 295 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 MRPL49P2-201ENST00000521066 465 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC023575.1-201ENST00000580510 358 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AP001029.3-201ENST00000588063 596 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AP001429.1-201ENST00000602568 530 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.79□□□□□ -1.8
BRF2Q9HAW0 AP001330.4-201ENST00000604350 154 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 BCRP9-201ENST00000605312 388 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 RNU4-89P-201ENST00000607443 133 ntBASIC3.79□□□□□ -1.8
BRF2Q9HAW0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms