Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
TDRD3Q9H7E2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
TDRD3Q9H7E2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.17□□□□□ -1.9
TDRD3Q9H7E2 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
TDRD3Q9H7E2 MTND5P11-201ENST00000511037 1812 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 RNU6-805P-201ENST00000365643 106 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 RNU6-441P-201ENST00000384545 106 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 ATP5F1P6-201ENST00000402768 767 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC021146.5-201ENST00000503544 545 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 YWHAEP4-201ENST00000505390 198 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC109329.2-201ENST00000519658 482 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC239860.2-201ENST00000525886 270 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC005046.1-201ENST00000608515 625 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC107294.3-201ENST00000609211 526 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC016911.1-201ENST00000613297 452 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC090116.1-201ENST00000615679 446 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 AC117529.2-201ENST00000512159 2068 ntBASIC3.16□□□□□ -1.9
TDRD3Q9H7E2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TDRD3Q9H7E2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TDRD3Q9H7E2 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 RNA5SP432-201ENST00000362480 116 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 SNORA70B-201ENST00000384210 135 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 NPM1P11-201ENST00000417106 855 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 ARL2BPP3-201ENST00000421226 480 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 RPL7P46-201ENST00000425129 740 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 OR2B8P-201ENST00000432841 938 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AL513321.1-201ENST00000441175 761 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 TRIM60P18-201ENST00000441518 828 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC007000.2-201ENST00000442564 487 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 RAB11AP1-201ENST00000442978 646 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 RPS27P23-201ENST00000487608 251 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC008549.1-201ENST00000512900 643 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AP001804.3-201ENST00000525146 880 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 OR8K4P-201ENST00000534608 872 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 CKS1BP1-201ENST00000555221 240 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC233266.2-201ENST00000567067 528 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC068722.2-201ENST00000618734 544 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC073569.3-201ENST00000619055 682 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AC064859.1-201ENST00000624741 174 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 AL355596.1-201ENST00000565399 3996 ntBASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TDRD3Q9H7E2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 SNORD62.1-201ENST00000362541 86 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC083799.1-201ENST00000366451 910 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC073310.1-201ENST00000423226 1033 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC233728.2-201ENST00000425348 757 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AL513124.1-201ENST00000450410 614 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 HMGB1P25-201ENST00000468402 607 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 POU5F1P7-201ENST00000508759 541 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 RNA5SP24-201ENST00000516478 95 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 HIGD1AP6-201ENST00000521833 279 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AL391156.1-201ENST00000554965 554 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC083760.1-201ENST00000589621 670 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC106791.2-201ENST00000604680 391 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 MIR1264-201ENST00000616374 69 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AC104820.1-201ENST00000624183 307 ntBASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.14□□□□□ -1.91
TDRD3Q9H7E2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.13□□□□□ -1.91
TDRD3Q9H7E2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.13□□□□□ -1.91
TDRD3Q9H7E2 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
TDRD3Q9H7E2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
TDRD3Q9H7E2 ATF1P1-201ENST00000406040 927 ntBASIC3.13□□□□□ -1.91
TDRD3Q9H7E2 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms