Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AC006499.5-201ENST00000505037 514 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 HMGN1P11-201ENST00000508668 303 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC104619.4-201ENST00000510773 249 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AC006960.3-201ENST00000561845 705 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 EIF1P4-201ENST00000572664 335 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC141257.3-201ENST00000572906 215 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC087752.4-201ENST00000605911 462 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AL159169.3-201ENST00000608871 561 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC108747.1-201ENST00000609508 535 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC025594.3-201ENST00000613068 790 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AL357080.1-201ENST00000617394 239 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.03□□□□□ -1.76
CDT1Q9H211 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AL359740.1-201ENST00000624340 592 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.03□□□□□ -1.76
CDT1Q9H211 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AL034408.1-202ENST00000636088 415 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 AL031985.3-201ENST00000565390 2449 ntBASIC4.03□□□□□ -1.76
CDT1Q9H211 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.03□□□□□ -1.76
CDT1Q9H211 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
CDT1Q9H211 PABPC1P9-201ENST00000426076 1612 ntBASIC4.03□□□□□ -1.77
CDT1Q9H211 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
CDT1Q9H211 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDT1Q9H211 RNU6-777P-201ENST00000364265 104 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 MIR670-201ENST00000390142 98 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 RNU6-952P-201ENST00000391164 108 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AL391219.1-201ENST00000422570 483 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC091286.1-201ENST00000431233 461 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.02□□□□□ -1.77
CDT1Q9H211 COX6CP12-201ENST00000446748 202 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC090453.1-201ENST00000495560 436 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.02□□□□□ -1.77
CDT1Q9H211 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.02□□□□□ -1.77
CDT1Q9H211 RNA5SP216-201ENST00000516111 123 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.02□□□□□ -1.77
CDT1Q9H211 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.02□□□□□ -1.77
CDT1Q9H211 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC092794.1-201ENST00000612734 582 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AC025588.4-201ENST00000615802 908 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AC091905.1-201ENST00000624400 311 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AC068137.3-201ENST00000639191 341 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC073869.6-201ENST00000640656 341 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 AP000553.6-201ENST00000641242 118 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 AL022578.1-201ENST00000439330 1433 ntBASIC4.02□□□□□ -1.77
CDT1Q9H211 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDT1Q9H211 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
CDT1Q9H211 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDT1Q9H211 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDT1Q9H211 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
CDT1Q9H211 MTCO1P23-201ENST00000415223 1526 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC018529.3-201ENST00000624212 2254 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDT1Q9H211 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDT1Q9H211 ZNF33CP-201ENST00000432492 2030 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.01□□□□□ -1.77
CDT1Q9H211 AL831737.1-201ENST00000441288 271 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 RPS3AP46-201ENST00000448352 682 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 USP9YP34-201ENST00000453983 808 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 SNORD108-201ENST00000459332 71 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 RPL21P103-201ENST00000479921 488 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC093767.1-201ENST00000504523 156 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.01□□□□□ -1.77
CDT1Q9H211 RPL37P25-201ENST00000507308 276 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.01□□□□□ -1.77
CDT1Q9H211 RNA5SP143-201ENST00000516936 115 ntBASIC4.01□□□□□ -1.77
CDT1Q9H211 MTND4LP26-201ENST00000518144 282 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms