Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RNU6-261P-201ENST00000459506 102 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RPS3AP50-201ENST00000487064 803 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC055855.1-201ENST00000489563 579 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 COX7A2P2-201ENST00000505291 250 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 FGF7P4-201ENST00000509595 295 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SNORA40.12-201ENST00000516329 111 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SCARNA15.1-201ENST00000516384 125 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 MIR3146-201ENST00000580367 79 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC233702.9-201ENST00000581528 203 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 UBE2L4-201ENST00000587688 464 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC013553.2-201ENST00000604244 589 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC115621.1-201ENST00000604653 858 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC004853.1-201ENST00000604902 698 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC009902.3-201ENST00000606235 2172 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL442067.2-201ENST00000614033 363 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL356585.4-201ENST00000623078 1229 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 AC092435.4-201ENST00000623012 4159 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 IQCB2P-201ENST00000401788 1633 ntBASIC4.42□□□□□ -1.7
NDC1Q9BTX1 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NDC1Q9BTX1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 MFSD8-242ENST00000641690 4199 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC011155.1-201ENST00000316512 456 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 RNU6-223P-201ENST00000362830 107 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 Y_RNA.157-201ENST00000363638 102 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 RNU6-108P-201ENST00000365558 107 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 FAT1P1-201ENST00000406588 507 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 RPS15AP12-201ENST00000419498 388 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 UQCRBP1-201ENST00000421129 336 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 EZH2P1-201ENST00000431167 291 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 RPL23AP30-201ENST00000432419 501 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 TAAR7P-201ENST00000436141 242 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC104308.1-201ENST00000454621 333 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 RPS27AP17-201ENST00000463344 455 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 MTCO2P29-201ENST00000465212 189 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 MTCO3P9-201ENST00000506989 781 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC090572.1-201ENST00000519251 160 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AP003072.2-201ENST00000527756 676 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AP003497.1-201ENST00000528472 562 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC009643.1-201ENST00000532030 391 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 DISC2.1-201ENST00000612827 205 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AP005019.3-201ENST00000620418 560 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 MIR4496-201ENST00000635896 61 ntBASIC4.41□□□□□ -1.7
NDC1Q9BTX1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NDC1Q9BTX1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NDC1Q9BTX1 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.4□□□□□ -1.7
NDC1Q9BTX1 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NDC1Q9BTX1 AL450326.2-201ENST00000421913 1962 ntBASIC4.4□□□□□ -1.7
NDC1Q9BTX1 OR14L1P-202ENST00000641545 3009 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 RNU6-1097P-201ENST00000363586 107 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 Y_RNA.548-201ENST00000384656 105 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.4□□□□□ -1.71
NDC1Q9BTX1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NDC1Q9BTX1 AL356432.1-201ENST00000405809 419 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms