Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 EXTL2P1-201ENST00000446218 416 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 AF186190.1-201ENST00000517470 480 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 AC008015.1-201ENST00000555505 465 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.73□□□□□ -2.13
COL12A1Q99715 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.73□□□□□ -2.13
COL12A1Q99715 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL12A1Q99715 AC009487.4-201ENST00000624969 3585 ntBASIC1.73□□□□□ -2.13
COL12A1Q99715 Y_RNA.30-201ENST00000362572 97 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 RNA5SP37-201ENST00000365420 130 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 RNU2-6P-201ENST00000411404 190 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.72□□□□□ -2.13
COL12A1Q99715 USP9YP5-201ENST00000511770 630 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 MTND5P27-201ENST00000428871 1720 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 AC006378.2-201ENST00000623178 2476 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 Y_RNA.458-201ENST00000384240 102 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 BX322784.1-201ENST00000455793 1077 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 AC108734.3-201ENST00000481241 1165 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AC084035.1-201ENST00000634543 607 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.72□□□□□ -2.13
COL12A1Q99715 AGGF1P8-201ENST00000562979 1000 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 AC019159.1-201ENST00000605094 187 ntBASIC1.72□□□□□ -2.13
COL12A1Q99715 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL12A1Q99715 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.72□□□□□ -2.13
COL12A1Q99715 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.71□□□□□ -2.14
COL12A1Q99715 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL12A1Q99715 SNORA7.1-201ENST00000363750 139 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 MIR3074-201ENST00000384885 81 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.71□□□□□ -2.14
COL12A1Q99715 MTND3P6-201ENST00000485242 339 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AC006390.1-201ENST00000508068 283 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.71□□□□□ -2.14
COL12A1Q99715 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.71□□□□□ -2.14
COL12A1Q99715 AC073387.2-201ENST00000604797 784 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AC120053.1-201ENST00000607706 736 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COL12A1Q99715 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL12A1Q99715 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.71□□□□□ -2.14
COL12A1Q99715 TRIM60P13-201ENST00000432350 1283 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.71□□□□□ -2.14
COL12A1Q99715 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 HMGB1P41-201ENST00000520234 440 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.71□□□□□ -2.14
COL12A1Q99715 AC087441.2-201ENST00000529141 262 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.71□□□□□ -2.14
COL12A1Q99715 AL645944.1-201ENST00000603857 493 ntBASIC1.71□□□□□ -2.14
COL12A1Q99715 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.71□□□□□ -2.14
COL12A1Q99715 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.71□□□□□ -2.14
COL12A1Q99715 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC1.71□□□□□ -2.14
COL12A1Q99715 SNORD21-201ENST00000383953 95 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 RNA5SP38-201ENST00000410750 119 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AC093767.1-201ENST00000504523 156 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL12A1Q99715 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 OR4G1P-201ENST00000588632 938 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL12A1Q99715 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.7□□□□□ -2.14
COL12A1Q99715 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 RNU2-32P-201ENST00000411193 191 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 RPL23AP39-201ENST00000415533 405 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AL138799.3-201ENST00000438968 350 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AL589765.3-201ENST00000446084 462 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AC092155.2-201ENST00000454675 477 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 OR4P1P-201ENST00000530808 1136 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.7□□□□□ -2.14
COL12A1Q99715 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AC006116.7-201ENST00000590141 756 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 AP006248.2-201ENST00000623309 592 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL12A1Q99715 PIGFP3-201ENST00000441918 722 ntBASIC1.7□□□□□ -2.14
COL12A1Q99715 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL12A1Q99715 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL12A1Q99715 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.7□□□□□ -2.14
COL12A1Q99715 AL035411.2-201ENST00000604022 421 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms