Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 VN1R83P-201ENST00000595685 445 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC069431.2-201ENST00000604149 1099 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC069304.2-201ENST00000605154 435 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 YPEL5P2-201ENST00000605553 359 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 PART1_2.1-201ENST00000612397 250 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 CYCSP41-201ENST00000616920 296 ntBASIC3.47□□□□□ -1.85
ZNF560Q96MR9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ZNF560Q96MR9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MIR491-201ENST00000384877 84 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MIR620-201ENST00000385232 95 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 SNRPEP2-201ENST00000397592 279 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MTND2P20-201ENST00000440805 661 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MTCO1P53-201ENST00000441633 699 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 SUMO2P2-201ENST00000456482 255 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC026410.2-201ENST00000460281 156 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 RN7SL863P-201ENST00000462370 296 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC017015.1-201ENST00000477387 286 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 RPL21P131-201ENST00000497298 483 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC026427.2-201ENST00000506228 536 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC105914.1-201ENST00000511798 226 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC010265.1-201ENST00000513509 211 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 SNORA31.8-201ENST00000516327 108 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 HSPA8P13-201ENST00000523715 472 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL163153.1-201ENST00000554223 283 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MTND3P13-201ENST00000574391 343 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MIR2682-201ENST00000580305 110 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL158163.2-201ENST00000619110 700 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL121895.2-201ENST00000619558 447 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AC009269.6-201ENST00000621778 588 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.46□□□□□ -1.86
ZNF560Q96MR9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF560Q96MR9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 SNORA9-201ENST00000384215 133 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 RPL7P30-201ENST00000420888 709 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 BX890604.2-201ENST00000427883 474 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AL353705.1-201ENST00000433468 480 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 HMGB3P11-201ENST00000440127 604 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 MRPS31P2-201ENST00000451581 518 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 ELOCP23-201ENST00000452014 332 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 MTND2P39-201ENST00000457230 764 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 RPS15AP17-201ENST00000470598 390 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 KLHL2P1-201ENST00000508691 521 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC010198.2-201ENST00000550612 259 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 SETP7-201ENST00000552169 453 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AP001029.3-201ENST00000588063 596 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC012493.2-201ENST00000595083 291 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AL365400.2-201ENST00000605604 902 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC080013.4-201ENST00000607624 649 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.45□□□□□ -1.86
ZNF560Q96MR9 uc_338.25-201ENST00000613756 156 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC138932.5-201ENST00000617759 563 ntBASIC3.45□□□□□ -1.86
ZNF560Q96MR9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms