Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL359999.1-201ENST00000604513 294 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 Y_RNA.812-201ENST00000610788 101 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 Y_RNA.784-201ENST00000613803 101 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.2□□□□□ -1.58
DDX11Q96FC9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 Y_RNA.787-201ENST00000616522 101 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 AC131238.1-201ENST00000617135 328 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 Y_RNA.780-201ENST00000617336 101 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 Y_RNA.801-201ENST00000619005 101 ntBASIC5.2□□□□□ -1.58
DDX11Q96FC9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
DDX11Q96FC9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX11Q96FC9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
DDX11Q96FC9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
DDX11Q96FC9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX11Q96FC9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.2□□□□□ -1.58
DDX11Q96FC9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 Y_RNA.86-201ENST00000363020 111 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 RNU6-952P-201ENST00000391164 108 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 MIR320C1-201ENST00000408566 88 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 RNA5SP118-201ENST00000410385 109 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 MTND3P17-201ENST00000416968 344 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AL035410.1-201ENST00000427409 427 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 NANOGP6-201ENST00000429190 847 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 KCTD9P3-201ENST00000434597 1169 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 NDUFA5P4-201ENST00000436704 385 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 SNRPEP7-201ENST00000438350 220 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 PHBP16-201ENST00000446318 950 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 RPL23AP15-201ENST00000450202 459 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC099563.1-201ENST00000456086 418 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC012158.1-204ENST00000483430 465 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 Y_RNA.672-201ENST00000516289 104 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 RNU6-1003P-201ENST00000517099 105 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 MYL12AP1-201ENST00000518490 515 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC007224.1-201ENST00000564410 144 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 Z98200.1-201ENST00000607298 470 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AL158196.1-201ENST00000616786 434 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AP002907.1-201ENST00000606361 1430 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
DDX11Q96FC9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DDX11Q96FC9 AC025125.1-201ENST00000624743 1922 ntBASIC5.19□□□□□ -1.58
DDX11Q96FC9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DDX11Q96FC9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 RNU6-845P-201ENST00000362578 103 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RNU6-984P-201ENST00000363236 109 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RNY3P3-201ENST00000363816 102 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RNU6-343P-201ENST00000364709 104 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 Y_RNA.326-201ENST00000365176 113 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC019155.1-201ENST00000382242 574 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AL590004.1-201ENST00000405321 300 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC133104.1-201ENST00000429100 218 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RPS27AP12-201ENST00000429552 465 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC005534.2-201ENST00000431047 433 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 HMGB3P9-201ENST00000441799 583 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 IFNWP4-201ENST00000453148 294 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RN7SL98P-201ENST00000462271 300 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 RPS15AP17-201ENST00000470598 390 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC010486.1-201ENST00000511793 424 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC034159.1-201ENST00000513885 583 ntBASIC5.18□□□□□ -1.58
DDX11Q96FC9 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.18□□□□□ -1.58
DDX11Q96FC9 AC090151.1-201ENST00000520784 730 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms