Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AL161781.1-201ENST00000354277 403 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 Y_RNA.263-201ENST00000364659 114 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 RPL31P1-201ENST00000398116 372 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL356967.1-201ENST00000406305 431 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 NUP35P2-201ENST00000416748 943 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 RPL30P3-201ENST00000424262 333 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL035410.1-201ENST00000427409 427 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL590233.1-201ENST00000430017 456 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 RPL7P54-201ENST00000438336 674 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC004938.1-201ENST00000438468 308 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 CALM1P1-201ENST00000442082 433 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 RPL36AP51-201ENST00000487216 318 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC023194.1-201ENST00000493084 308 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 MTND3P22-201ENST00000510932 243 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 CENPUP1-201ENST00000526649 1202 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL109766.1-201ENST00000555080 552 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL359212.1-201ENST00000556608 614 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 MIR1254-2-201ENST00000579553 63 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 MIR3138-201ENST00000585238 82 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL020997.2-201ENST00000602607 184 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC020910.2-201ENST00000603635 610 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC087045.1-201ENST00000605856 382 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC114781.5-201ENST00000615297 108 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC010133.1-201ENST00000615809 842 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC009318.4-201ENST00000620496 486 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL356585.4-201ENST00000623078 1229 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 AL356489.2-201ENST00000566968 3528 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF31Q96EP0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF31Q96EP0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF31Q96EP0 LINC00622-201ENST00000562811 1570 ntBASIC4.36□□□□□ -1.71
RNF31Q96EP0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF31Q96EP0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF31Q96EP0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU1-83P-201ENST00000363426 164 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 Y_RNA.535-201ENST00000384612 99 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 MIR195-201ENST00000385194 87 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC069218.2-201ENST00000411665 344 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 MTATP6P18-201ENST00000417994 673 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC092832.1-201ENST00000422934 400 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 EIF4HP2-201ENST00000424380 563 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 COX6CP15-201ENST00000426313 211 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 GTF2IP20-201ENST00000431663 360 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RPS15AP9-201ENST00000439856 381 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AL136380.1-201ENST00000447970 162 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RAD23BP3-201ENST00000454157 1152 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AP1S2P1-201ENST00000457344 379 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RN7SL517P-201ENST00000462240 305 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC083798.1-201ENST00000472671 131 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC010587.1-201ENST00000505809 469 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU6-835P-201ENST00000516974 104 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AP003072.2-201ENST00000527756 676 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 ANP32BP3-201ENST00000559213 706 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AL356432.3-201ENST00000568952 465 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC099489.2-201ENST00000574976 260 ntBASIC4.35□□□□□ -1.71
RNF31Q96EP0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF31Q96EP0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms