Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC019226.1-201ENST00000625666 515 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC140479.6-201ENST00000633535 357 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 AC027287.1-201ENST00000553115 1453 ntBASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTHRC1Q96CG8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 A2MP1-204ENST00000566278 4130 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNA5SP28-201ENST00000363841 119 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNA5SP509-201ENST00000364577 119 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNY4P16-201ENST00000364768 94 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNU6-282P-201ENST00000365357 103 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC068538.1-201ENST00000376856 336 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.409-201ENST00000383990 98 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 Y_RNA.493-201ENST00000384422 102 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNU6-456P-201ENST00000384493 107 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNU6-114P-201ENST00000384704 105 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 SNORD66.1-201ENST00000391230 76 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 HSPD1P16-201ENST00000402302 394 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNU4-25P-201ENST00000410569 230 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNU2-62P-201ENST00000410868 191 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 USP9YP27-201ENST00000418455 438 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 ELOCP4-201ENST00000420090 333 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RBMY1KP-201ENST00000423480 476 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 EIF1P3-201ENST00000423841 334 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC005517.2-201ENST00000424673 553 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL157831.1-201ENST00000426134 473 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 C4BPAP2-201ENST00000428434 478 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RPL23AP52-201ENST00000439311 478 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RPL29P29-201ENST00000448725 423 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RPS23P7-201ENST00000466210 444 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC011276.1-201ENST00000469688 323 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 RNA5SP73-201ENST00000516744 108 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC118273.2-201ENST00000532092 465 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 SETP7-201ENST00000552169 453 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC025678.1-201ENST00000567861 338 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 MIR3167-201ENST00000579623 85 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 UBE2L4-201ENST00000587688 464 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL354984.3-201ENST00000604803 325 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL391813.2-201ENST00000609113 322 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 MIR6758-201ENST00000620653 63 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 MIR7154-201ENST00000620673 73 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL158801.5-201ENST00000623123 465 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC139792.3-201ENST00000623525 224 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AC112204.3-201ENST00000623822 332 ntBASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.03□□□□□ -1.76
CTHRC1Q96CG8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
CTHRC1Q96CG8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CTHRC1Q96CG8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 MTCO1P24-201ENST00000515438 1558 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC009951.1-201ENST00000623674 2614 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC067945.1-201ENST00000342609 618 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RNU1-15P-201ENST00000353977 144 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 RNY3P14-201ENST00000384309 102 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 MIR153-1-201ENST00000384914 90 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 HMGB3P12-201ENST00000438745 556 ntBASIC4.02□□□□□ -1.77
CTHRC1Q96CG8 MTCO3P18-201ENST00000440206 761 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms