Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AL359893.1-201ENST00000447628 1580 ntBASIC2.47□□□□□ -2.01
LMX1AQ8TE12 AL355578.1-201ENST00000607405 1328 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RNU6-50P-201ENST00000362356 103 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 SNORD114-30-201ENST00000364448 72 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 MIR518C-201ENST00000384822 101 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC073310.1-201ENST00000423226 1033 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 ZFAND6P1-201ENST00000434138 605 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RPS27P5-201ENST00000444247 244 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AL513124.1-201ENST00000450410 614 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 CACYBPP2-201ENST00000453625 678 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RPL23AP45-201ENST00000476406 468 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC103975.1-201ENST00000482506 483 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 DYNLL1P6-201ENST00000503440 264 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RPL7L1P13-201ENST00000511702 739 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 CKS1BP7-201ENST00000522230 235 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AP000857.1-201ENST00000532151 543 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 MTCYBP28-201ENST00000566728 1132 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 RPL23AP84-201ENST00000571193 464 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC090312.2-201ENST00000582687 378 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 AC104307.1-201ENST00000616142 196 ntBASIC2.46□□□□□ -2.02
LMX1AQ8TE12 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LMX1AQ8TE12 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 MAPK10-322ENST00000641485 4530 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 U8.9-201ENST00000365667 134 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 DEFB109C-201ENST00000382575 264 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 DEFB109B-201ENST00000382656 264 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 RNU4-65P-201ENST00000410473 140 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AL390023.1-201ENST00000428836 262 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 UBE2D3P1-201ENST00000436669 444 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 FABP5P3-201ENST00000437960 408 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 TRIM60P18-201ENST00000441518 828 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 RPS26P56-201ENST00000444468 240 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 MRPL50P4-201ENST00000446432 475 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 RPL23AP23-201ENST00000452590 471 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC008549.1-201ENST00000512900 643 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 RNA5SP468-201ENST00000516782 93 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC026616.1-201ENST00000523157 525 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC083923.1-201ENST00000523708 376 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 C1DP5-201ENST00000525775 383 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC027104.1-201ENST00000563702 681 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC007938.3-201ENST00000604965 623 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 STMN1P1-201ENST00000617809 440 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 FRG1HP-204ENST00000617940 757 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 FRG1DP-201ENST00000635586 771 ntBASIC2.45□□□□□ -2.02
LMX1AQ8TE12 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.45□□□□□ -2.02
LMX1AQ8TE12 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC092435.3-201ENST00000565538 3654 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 U8.2-201ENST00000363156 134 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RNU6-629P-201ENST00000384061 103 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 SNORA51.12-201ENST00000384448 134 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 MIR181B1-201ENST00000385240 110 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AL139095.1-201ENST00000404326 391 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RNU4-53P-201ENST00000410828 140 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RPS20P25-201ENST00000412447 352 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 NPM1P11-201ENST00000417106 855 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 HSPE1P1-201ENST00000421494 318 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 FCF1P1-201ENST00000432690 571 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RPS7P2-201ENST00000435134 607 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC007000.2-201ENST00000442564 487 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms