Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RPL31P50-201ENST00000471002 296 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RPL39P36-201ENST00000490784 156 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 COX6CP8-201ENST00000522620 226 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 HSPE1P5-201ENST00000561489 272 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AL845331.3-202ENST00000562856 261 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AL133457.1-201ENST00000564251 987 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC034268.2-201ENST00000571784 482 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LARP7P2-201ENST00000575306 125 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AL359999.1-201ENST00000604513 294 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC009233.1-201ENST00000616477 371 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC009268.2-201ENST00000621925 457 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 AC106871.1-201ENST00000568324 3102 ntBASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.41□□□□□ -1.7
SLC44A3Q8N4M1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 AP002907.1-201ENST00000606361 1430 ntBASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 AC006026.1-201ENST00000444025 1803 ntBASIC4.4□□□□□ -1.7
SLC44A3Q8N4M1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-343P-201ENST00000364709 104 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-282P-201ENST00000365357 103 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-921P-201ENST00000384361 107 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 MIR449B-201ENST00000384995 97 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL603766.1-201ENST00000407763 664 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 TPMTP2-201ENST00000414372 726 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC133104.1-201ENST00000429100 218 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL445584.1-201ENST00000431451 330 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RPEP2-201ENST00000432149 701 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 ARPC3P1-201ENST00000437218 533 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC073587.1-201ENST00000447093 876 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL133547.1-201ENST00000448546 220 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 FDX1P2-201ENST00000450769 375 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RNU6-420P-201ENST00000458780 107 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC026410.2-201ENST00000460281 156 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 MTCO3P9-201ENST00000506989 781 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 Y_RNA.672-201ENST00000516289 104 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 CENPUP1-201ENST00000526649 1202 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AP003181.2-201ENST00000528941 181 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC107918.3-201ENST00000533272 382 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 MIR5685-201ENST00000579080 79 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC091178.1-203ENST00000584586 279 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 VN1R84P-201ENST00000593697 235 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC068790.5-201ENST00000602741 355 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL606490.9-201ENST00000603331 271 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC243654.2-201ENST00000612843 443 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC139792.3-201ENST00000623525 224 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC012442.3-202ENST00000636742 206 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC134882.1-201ENST00000603738 1676 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SLC44A3Q8N4M1 DDX18P3-201ENST00000404856 2007 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A3Q8N4M1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms