Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC009220.3-201ENST00000604318 586 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC080013.3-201ENST00000606839 578 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC034229.4-201ENST00000607861 441 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC243773.3-201ENST00000613270 256 ntBASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
C9orf40Q8IXQ3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RNU6-335P-201ENST00000364563 113 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 Y_RNA.311-201ENST00000365068 96 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 U3.19-201ENST00000390893 196 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RNU6-821P-201ENST00000390995 107 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL583834.1-201ENST00000406943 343 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 TIMM9P2-201ENST00000419324 266 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RPL23AP74-201ENST00000437246 471 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 FGF7P5-201ENST00000441829 291 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC125238.1-201ENST00000448842 249 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 TRGVB-201ENST00000453257 471 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 OFD1P3Y-201ENST00000453312 783 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 USP9YP34-201ENST00000453983 808 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 NECAP1P2-201ENST00000455668 727 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC026410.2-201ENST00000460281 156 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RPS4XP22-201ENST00000480755 780 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC078918.1-201ENST00000498515 228 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC091951.3-201ENST00000504093 246 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RNU6-583P-201ENST00000516012 92 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RNY4P37-201ENST00000516225 96 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC104986.1-201ENST00000517978 436 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 NBEAP1-201ENST00000554452 979 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL845331.3-202ENST00000562856 261 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL512347.1-201ENST00000566420 503 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 MIR5680-201ENST00000577577 84 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC245036.5-201ENST00000596330 847 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC097478.2-201ENST00000610572 514 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AC040168.1-201ENST00000623594 991 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 SNORA50A-202ENST00000629536 136 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 MIR4278-201ENST00000636094 69 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AL157700.1-201ENST00000561973 1432 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 AP002907.1-201ENST00000606361 1430 ntBASIC3.01□□□□□ -1.93
C9orf40Q8IXQ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 MTND5P27-201ENST00000428871 1720 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RNA5SP387-201ENST00000364226 106 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RNU6-621P-201ENST00000364752 109 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 U3.29-201ENST00000391296 212 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 HMGB1P49-201ENST00000418882 569 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AL139421.1-201ENST00000423010 169 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 GLRXP1-201ENST00000423261 334 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 BX679664.1-201ENST00000434429 253 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 MTCO2P20-201ENST00000437339 673 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 HMGB3P11-201ENST00000440127 604 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 NPM1P49-201ENST00000448027 714 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RN7SL807P-201ENST00000470923 297 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RN7SL442P-201ENST00000473804 320 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RN7SKP265-201ENST00000516448 223 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3□□□□□ -1.93
C9orf40Q8IXQ3 MTCO2P15-201ENST00000532655 656 ntBASIC3□□□□□ -1.93
C9orf40Q8IXQ3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms