Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ELOCP19-201ENST00000411919 318 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 MTND3P8-201ENST00000412909 339 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC245028.1-201ENST00000423259 256 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 RPS26P40-201ENST00000435209 294 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL031663.1-201ENST00000437445 219 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL035551.1-201ENST00000446931 348 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 Y_RNA.632-201ENST00000459189 102 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RN7SL817P-201ENST00000480777 288 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RPS15AP36-201ENST00000492022 382 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 RNU6-714P-201ENST00000516963 103 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC090151.1-201ENST00000520784 730 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC107953.1-201ENST00000522216 297 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 RPL23AP97-201ENST00000568955 471 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 HMGB1P6-201ENST00000569046 646 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC079587.1-201ENST00000603846 277 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC115621.1-201ENST00000604653 858 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC106900.2-201ENST00000604994 317 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL355802.3-201ENST00000607571 545 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 LINC00901.1-201ENST00000617252 152 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 RMST_7.1-201ENST00000621935 268 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VRK3Q8IV63 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.31□□□□□ -1.72
VRK3Q8IV63 AL049780.3-201ENST00000624612 1583 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
VRK3Q8IV63 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 MTND5P3-201ENST00000438536 1800 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 MTND4P27-201ENST00000450813 1354 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 RNU6-984P-201ENST00000363236 109 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 Y_RNA.315-201ENST00000365117 102 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 RNU6-225P-201ENST00000384613 103 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 MIR3065-201ENST00000390137 79 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 SNORA75.4-201ENST00000391278 119 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 RPL32P23-201ENST00000397237 405 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AL807761.1-201ENST00000417622 171 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 IFNA20P-201ENST00000436840 528 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 RPS15AP9-201ENST00000439856 381 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC114495.1-201ENST00000441274 436 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC090453.1-201ENST00000495560 436 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VRK3Q8IV63 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 RN7SKP116-201ENST00000516902 319 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC087241.2-201ENST00000535801 324 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC123904.2-201ENST00000548059 300 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 GSTP1P1-201ENST00000548078 319 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC093249.1-201ENST00000567049 203 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 VN1R84P-201ENST00000593697 235 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC010591.1-201ENST00000603941 649 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.3□□□□□ -1.72
VRK3Q8IV63 AC090948.1-201ENST00000607464 549 ntBASIC4.3□□□□□ -1.72
VRK3Q8IV63 OR10AB1P-201ENST00000609613 938 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms