Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 MIR365B-201ENST00000362317 111 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 RPS7P5-201ENST00000441482 581 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC004486.1-201ENST00000546846 233 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 MIR6515-201ENST00000619843 57 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 PVT1_3.1-201ENST00000620853 95 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 RNU6-984P-201ENST00000363236 109 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 RNU6-178P-201ENST00000384631 104 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 RPS15AP17-201ENST00000470598 390 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC110588.1-201ENST00000559699 137 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 ZNF542P-204ENST00000482727 1305 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 RNU6-342P-201ENST00000384521 104 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 HMGB1P11-201ENST00000413899 637 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 EXTL2P1-201ENST00000446218 416 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC025260.1-201ENST00000548858 430 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC002984.1-201ENST00000591692 448 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC010872.1-201ENST00000624225 675 ntBASIC1.41□□□□□ -2.18
CSMD3Q7Z407 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSMD3Q7Z407 AC026241.1-201ENST00000517873 2142 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 EI24P1-201ENST00000416584 867 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 HMGB1P31-201ENST00000437242 427 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 RPL36AP33-201ENST00000450395 310 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 AC093331.1-201ENST00000521474 169 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 OR4P1P-201ENST00000530808 1136 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 RN7SL622P-201ENST00000585292 275 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 AL139286.1-201ENST00000604465 483 ntBASIC1.4□□□□□ -2.18
CSMD3Q7Z407 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.4□□□□□ -2.18
CSMD3Q7Z407 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 RNU6-356P-201ENST00000384140 107 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL023807.1-201ENST00000407932 359 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 RPL12P25-201ENST00000455592 494 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL121594.1-201ENST00000475906 575 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC107918.3-201ENST00000533272 382 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 MIR4452-201ENST00000583004 71 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL160237.3-201ENST00000604114 1013 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC010680.1-201ENST00000590024 3590 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 U8.8-201ENST00000365399 135 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL021407.1-201ENST00000404531 386 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL358453.1-201ENST00000422522 250 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AL163540.1-201ENST00000485382 386 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.4□□□□□ -2.19
CSMD3Q7Z407 AC095038.3-201ENST00000634439 195 ntBASIC1.4□□□□□ -2.19
CSMD3Q7Z407 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 MTCYBP19-201ENST00000517463 1124 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 OR5D17P-201ENST00000531492 978 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC005951.1-201ENST00000576706 485 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL160394.1-201ENST00000624765 724 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL353746.1-201ENST00000566293 6881 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 Y_RNA.191-201ENST00000363972 113 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.39□□□□□ -2.19
CSMD3Q7Z407 OR52A4P-203ENST00000498233 1014 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 RPL23AP63-201ENST00000498752 471 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AL359198.2-201ENST00000611836 194 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC091834.1-201ENST00000614543 472 ntBASIC1.39□□□□□ -2.19
CSMD3Q7Z407 AC110774.1-201ENST00000623567 2018 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms