Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MAPK10-253ENST00000641010 4072 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MIR181A1-201ENST00000385026 110 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RPL21P17-201ENST00000397467 475 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RPL7P60-201ENST00000397636 735 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 HMGB3P23-201ENST00000414981 585 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC069157.1-201ENST00000421749 137 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 USP9YP18-201ENST00000425912 695 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 BX890604.2-201ENST00000427883 474 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 NANOGP6-201ENST00000429190 847 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 KCTD9P3-201ENST00000434597 1169 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 LSM1P1-201ENST00000438629 273 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RPL7P36-201ENST00000444633 681 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 IFNWP4-201ENST00000453148 294 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MTCO3P38-201ENST00000468910 766 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RPL9P6-201ENST00000492764 598 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 TMEM251P1-201ENST00000503717 318 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RAC1P2-201ENST00000511164 579 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AF131216.2-201ENST00000512316 564 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC022483.1-201ENST00000514020 567 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 RNA5SP208-201ENST00000516156 78 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 HSPA8P13-201ENST00000523715 472 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MIR4716-201ENST00000579628 84 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AP001180.3-201ENST00000582221 145 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC098614.4-201ENST00000607601 462 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AP001506.1-201ENST00000615444 211 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MIR4727-201ENST00000622232 55 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 OR5H6-203ENST00000642105 978 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 AC004520.1-201ENST00000608362 1413 ntBASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
UBE3BQ7Z3V4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 RPL17P50-201ENST00000396131 546 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 RPL31P52-201ENST00000407532 367 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 SYF2P2-201ENST00000417620 583 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC091286.1-201ENST00000431233 461 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AL139415.2-201ENST00000431968 163 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AL451050.1-201ENST00000450126 415 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 ZNF705CP-201ENST00000530515 889 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 MIR5186-201ENST00000577504 120 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 MIR5187-201ENST00000583479 76 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC090578.1-201ENST00000604955 591 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 HSPE1P14-201ENST00000605812 302 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AP002907.1-201ENST00000606361 1430 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC128687.2-201ENST00000609657 566 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 AC103710.1-201ENST00000610003 901 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 U6.101-201ENST00000637707 76 ntBASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.76□□□□□ -1.65
UBE3BQ7Z3V4 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
UBE3BQ7Z3V4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms