Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC007390.1-201ENST00000415722 356 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC127526.1-201ENST00000417526 366 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RPEP3-201ENST00000425462 676 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RPS17P8-201ENST00000434525 335 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 FTH1P1-201ENST00000437933 532 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RPL21P89-201ENST00000444021 467 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RAC1P7-201ENST00000445367 377 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RNU7-59P-201ENST00000459101 61 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL163973.1-201ENST00000484753 577 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC026979.1-201ENST00000492525 396 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RN7SL558P-201ENST00000497468 299 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 SNORD116-26-201ENST00000516006 96 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 RN7SKP277-201ENST00000516895 283 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 OR4P1P-201ENST00000530808 1136 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC074050.1-201ENST00000563247 211 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC093249.4-201ENST00000564755 259 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AL354950.2-201ENST00000617939 290 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 AC112204.3-201ENST00000623822 332 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 MIR4496-201ENST00000635896 61 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 TLK1P1-201ENST00000456760 2440 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 LINC01355-201ENST00000566551 5444 ntBASIC5.29□□□□□ -1.56
RUFY4Q6ZNE9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC139713.2-214ENST00000642059 1811 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 RPL7P26-201ENST00000333817 754 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 HSPE1P11-201ENST00000339579 310 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 SNORD113.2-201ENST00000364166 89 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC068538.1-201ENST00000376856 336 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 Y_RNA.548-201ENST00000384656 105 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 CHIAP3-201ENST00000423668 1133 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC008850.1-201ENST00000427546 362 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 ARL2BPP10-201ENST00000446487 531 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC020890.1-201ENST00000491837 504 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC093278.1-201ENST00000494700 600 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 OR5B19P-201ENST00000531766 928 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 SETP7-201ENST00000552169 453 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC068831.4-201ENST00000556118 109 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC105129.1-201ENST00000560250 297 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC136624.4-201ENST00000573044 370 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 RPS3AP23-202ENST00000574601 686 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC113194.1-201ENST00000606037 500 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC105429.2-201ENST00000610567 517 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC233309.1-201ENST00000619522 751 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC015908.5-201ENST00000623289 343 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 AC009643.2-201ENST00000603543 1448 ntBASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.28□□□□□ -1.56
RUFY4Q6ZNE9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 RNU6-996P-201ENST00000365438 107 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 Y_RNA.529-201ENST00000384586 119 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 RPS12P5-201ENST00000423449 371 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 MED13P1-201ENST00000428342 171 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 SRIP2-201ENST00000428470 166 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 GMFBP1-201ENST00000467831 427 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC007537.2-201ENST00000472093 511 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 AC078785.3-201ENST00000476607 425 ntBASIC5.27□□□□□ -1.57
RUFY4Q6ZNE9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms