Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF111Q6ZNA4 RNU6-1188P-201ENST00000363795 107 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 SNORA24.1-201ENST00000384401 135 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MIR223-201ENST00000385204 110 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL035079.1-201ENST00000405210 287 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL591848.1-201ENST00000413092 322 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC069213.2-201ENST00000420238 366 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 FABP5P14-201ENST00000437273 393 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MTCO3P10-201ENST00000455912 772 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 Z92846.1-201ENST00000456203 268 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RN7SL629P-201ENST00000489622 285 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RPS27P27-201ENST00000498779 255 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MTCYBP40-201ENST00000509390 1135 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC098591.2-201ENST00000510152 315 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ENPP7P9-201ENST00000514456 627 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RNU6-256P-201ENST00000516747 97 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RNU6-64P-201ENST00000517119 105 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP373-201ENST00000517271 95 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 IGLV2-28-201ENST00000520681 304 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL137161.1-201ENST00000532231 390 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC090022.1-201ENST00000546569 311 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MIR1269B-201ENST00000580405 75 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC024619.4-201ENST00000580924 316 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 RN7SL708P-201ENST00000580952 299 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MIR5690-201ENST00000583739 73 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MIR3672-201ENST00000584290 82 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC008814.1-201ENST00000603797 406 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC007938.3-201ENST00000604965 623 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC126915.2-201ENST00000610957 190 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 DUSP12P1-201ENST00000612874 516 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC090510.2-201ENST00000617465 629 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MTND5P19-201ENST00000424872 1794 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AL672167.1-203ENST00000641299 2975 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 MTND5P10-201ENST00000603719 1809 ntBASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.9□□□□□ -1.63
RNF111Q6ZNA4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNU6-1287P-201ENST00000362914 107 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNU1-146P-201ENST00000364015 165 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNVU1-3-201ENST00000364313 161 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNA5SP223-201ENST00000365174 120 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNU6-1060P-201ENST00000384664 107 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RNU6-331P-201ENST00000384724 107 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 Y_RNA.576-201ENST00000384781 102 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AL139396.1-201ENST00000421137 167 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AL139148.1-201ENST00000427122 680 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC009238.2-201ENST00000431026 355 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC016696.1-201ENST00000446949 318 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 MIR2053-201ENST00000459295 91 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RN7SL189P-201ENST00000468631 289 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AL135752.1-201ENST00000479477 471 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC090686.1-201ENST00000481577 749 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 RN7SL809P-201ENST00000482040 297 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 HIGD1AP14-201ENST00000507617 282 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC017037.2-201ENST00000513850 890 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 IMMP1LP2-201ENST00000552954 492 ntBASIC4.89□□□□□ -1.63
RNF111Q6ZNA4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms