Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC018630.1-201ENST00000541376 925 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AL389895.1-201ENST00000554127 252 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC006349.1-201ENST00000555526 235 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC025884.1-201ENST00000556034 378 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC040958.1-201ENST00000561102 201 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AC080078.3-201ENST00000605407 463 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 AL136164.3-201ENST00000624429 3978 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 OR4G1P-203ENST00000641984 1631 ntBASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CNKSR3Q6P9H4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC114546.3-201ENST00000623582 1734 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AP002907.1-201ENST00000606361 1430 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.31-201ENST00000362574 102 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-169P-201ENST00000365336 107 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-730P-201ENST00000383954 104 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-639P-201ENST00000384074 107 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 MIR23B-201ENST00000384832 97 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPL21P67-201ENST00000402896 478 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPL23AP26-201ENST00000412728 464 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 DUTP6-201ENST00000425573 462 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPS20P1-201ENST00000434853 354 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPS3AP54-201ENST00000435535 734 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPL23AP93-201ENST00000440847 484 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AL359073.1-201ENST00000448036 403 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-1208P-201ENST00000459588 107 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPL7P15-201ENST00000461190 712 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 HMGN2P26-201ENST00000463169 339 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 UQCRHP4-201ENST00000471686 272 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC105137.1-201ENST00000484355 562 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC091167.1-201ENST00000492017 396 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPS4XP18-201ENST00000495480 763 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 FTH1P24-201ENST00000503502 462 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC097486.1-201ENST00000515331 210 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.718-201ENST00000517110 102 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RN7SKP256-201ENST00000517201 314 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 SOD1P3-201ENST00000518682 454 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 RPL23AP53-201ENST00000521854 457 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC022861.1-201ENST00000522981 663 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC107918.3-201ENST00000533272 382 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC123904.2-201ENST00000548059 300 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 FKBP1BP1-201ENST00000553366 325 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC110588.1-201ENST00000559699 137 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 POLR3GP2-201ENST00000588366 668 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 7SK.7-201ENST00000603504 247 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC019193.3-201ENST00000609144 554 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 BX664608.1-201ENST00000610519 487 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AL354950.2-201ENST00000617939 290 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AC010149.2-201ENST00000637608 315 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AL031119.1-201ENST00000404707 1879 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 LARP1BP1-201ENST00000506036 1359 ntBASIC5□□□□□ -1.61
CNKSR3Q6P9H4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CNKSR3Q6P9H4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 MTCO1P12-201ENST00000414273 1543 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 AC006020.1-201ENST00000420179 1854 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 IQCB2P-201ENST00000401788 1633 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 RNU1-94P-201ENST00000362627 173 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 Y_RNA.401-201ENST00000383965 117 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 RNU6-784P-201ENST00000384330 106 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 SNORA68.2-201ENST00000391263 128 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 HMGB1P17-201ENST00000403495 628 ntBASIC4.99□□□□□ -1.61
CNKSR3Q6P9H4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms