Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZNF549Q6P9A3 DDX18P3-201ENST00000404856 2007 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC090971.4-201ENST00000560291 1800 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC025125.1-201ENST00000624743 1922 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 MIR92A2-201ENST00000385299 75 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RPS3AP36-201ENST00000398190 775 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL121972.1-201ENST00000402023 252 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 GSTA9P-201ENST00000406231 611 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 FCF1P10-201ENST00000407590 479 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP317-201ENST00000410176 116 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP311-201ENST00000411290 116 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL691449.1-201ENST00000426570 421 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC010881.1-201ENST00000433830 235 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ATP5HP2-201ENST00000433885 485 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL451074.3-201ENST00000437709 472 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC098614.3-201ENST00000438957 440 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 MTND4LP16-201ENST00000440828 295 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 DPPA3P1-201ENST00000448050 469 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 MTND3P10-201ENST00000450967 341 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 BTF3P5-201ENST00000457252 467 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 PPIAP21-201ENST00000464473 501 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 MTCYBP18-201ENST00000501056 747 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 POU5F1P7-201ENST00000508759 541 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC009646.1-201ENST00000510455 318 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 SAP18P1-201ENST00000512058 390 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 MTND5P4-201ENST00000514978 288 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP315-201ENST00000516340 116 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNA5SP312-201ENST00000517068 116 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC137800.2-201ENST00000574375 120 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 BNIP3P23-201ENST00000599655 511 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL158211.4-201ENST00000606988 584 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 RNU4-89P-201ENST00000607443 133 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL731566.2-201ENST00000618971 317 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AL139089.1-201ENST00000620372 975 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC068880.5-201ENST00000624331 290 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC026951.1-201ENST00000559530 2459 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 AC093535.2-201ENST00000624769 2326 ntBASIC3.88□□□□□ -1.79
ZNF549Q6P9A3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AC117529.2-201ENST00000512159 2068 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 SNORA70.2-201ENST00000364506 135 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RNU6-533P-201ENST00000384144 107 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RNU6-769P-201ENST00000384407 104 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RNU6-809P-201ENST00000384461 107 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RNU1-89P-201ENST00000384592 164 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 AL049693.1-201ENST00000402760 611 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RN7SKP266-201ENST00000410232 287 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 RNU2-28P-201ENST00000410457 189 ntBASIC3.87□□□□□ -1.79
ZNF549Q6P9A3 MTCO1P17-201ENST00000411522 491 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms