Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL138799.3-201ENST00000438968 350 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC093156.1-201ENST00000440382 670 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 BRK1P2-201ENST00000442875 223 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL359073.1-201ENST00000448036 403 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC104073.1-201ENST00000451988 151 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.632-201ENST00000459189 102 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RPL21P126-201ENST00000470049 478 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL136126.1-201ENST00000473603 402 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC091167.1-201ENST00000492017 396 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC021146.1-201ENST00000511202 716 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 RN7SKP116-201ENST00000516902 319 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 SETP2-201ENST00000553886 926 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC093249.4-201ENST00000564755 259 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC018552.3-201ENST00000567416 561 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 MIR4742-201ENST00000581069 85 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC093227.2-201ENST00000589357 285 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC004853.1-201ENST00000604902 698 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL445567.2-201ENST00000618935 498 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC009318.4-201ENST00000620496 486 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC079684.1-201ENST00000621405 437 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL159972.1-201ENST00000625150 448 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 AC009229.4-201ENST00000623854 1947 ntBASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PRPF40BQ6NWY9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 LARP1BP1-201ENST00000506036 1359 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC011460.1-201ENST00000636268 1834 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AL122126.1-201ENST00000546905 1318 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC093849.1-201ENST00000563631 2209 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.184-201ENST00000363884 108 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.474-201ENST00000384341 102 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC127526.1-201ENST00000417526 366 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 SRIP2-201ENST00000428470 166 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 UBE2V1P13-201ENST00000436983 439 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 H2AFZP5-201ENST00000446960 382 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 NUTF2P3-201ENST00000448540 384 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC055855.1-201ENST00000489563 579 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC114797.1-201ENST00000514003 728 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC112206.3-201ENST00000514578 389 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC104057.1-201ENST00000515547 497 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 RNU4-49P-201ENST00000516080 140 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.719-201ENST00000517156 106 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AP005597.4-201ENST00000526762 229 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 SCOCP1-201ENST00000554676 349 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 RPL21P12-201ENST00000559810 515 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC012182.1-201ENST00000570133 895 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AP000843.1-201ENST00000624880 701 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 U3.53-201ENST00000628922 216 ntBASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PRPF40BQ6NWY9 MTND5P28-201ENST00000438005 1594 ntBASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PRPF40BQ6NWY9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms