Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC244517.3-201ENST00000616254 1235 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 DCAF13P1-201ENST00000495256 1330 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 U3.15-201ENST00000365398 212 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AL160275.2-201ENST00000412010 394 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC098826.1-201ENST00000433943 471 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 RPL5P30-201ENST00000465511 891 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 SNORA9.1-201ENST00000362412 131 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 Y_RNA.571-201ENST00000384753 98 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AL353597.2-202ENST00000434901 373 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC017007.3-201ENST00000479865 435 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 HNRNPKP5-201ENST00000515300 253 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 RNU6-53P-201ENST00000365367 106 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 USP12PY-201ENST00000427677 1064 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 RNU6-513P-201ENST00000516104 104 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 SUB1P4-201ENST00000566062 339 ntBASIC1.29□□□□□ -2.2
UBR4Q5T4S7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UBR4Q5T4S7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 IFNWP4-201ENST00000453148 294 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 HIGD1AP10-201ENST00000527837 282 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 MIR3683-201ENST00000580847 82 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 MIR6788-201ENST00000618842 66 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC073476.4-201ENST00000628409 72 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 snoU13.19-201ENST00000459148 104 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 TMEM248P1-201ENST00000510579 951 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC104027.1-201ENST00000521887 300 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC103710.1-201ENST00000610003 901 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AL596275.2-204ENST00000641628 552 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AL596275.2-206ENST00000641957 626 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC097714.1-201ENST00000511272 1647 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 ELL2P4-201ENST00000446870 1376 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC093084.1-201ENST00000424233 687 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 RPS3AP44-201ENST00000425466 790 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 CALM1P2-201ENST00000452941 448 ntBASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBR4Q5T4S7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
UBR4Q5T4S7 MIR1294-201ENST00000408503 142 ntBASIC1.28□□□□□ -2.21
UBR4Q5T4S7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC1.28□□□□□ -2.21
UBR4Q5T4S7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
UBR4Q5T4S7 RNU6-826P-201ENST00000516827 104 ntBASIC1.28□□□□□ -2.21
UBR4Q5T4S7 Y_RNA.804-201ENST00000615262 101 ntBASIC1.28□□□□□ -2.21
UBR4Q5T4S7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.28□□□□□ -2.21
UBR4Q5T4S7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
UBR4Q5T4S7 SNORD114-27-201ENST00000363766 70 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 RNA5SP212-201ENST00000391223 107 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL358176.2-201ENST00000425769 204 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 HMGB1P27-201ENST00000431429 603 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 VDAC1P3-201ENST00000434069 851 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 HMGB3P6-201ENST00000444896 598 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC116447.1-201ENST00000613153 453 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC093909.5-201ENST00000621839 1799 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AC069218.2-201ENST00000411665 344 ntBASIC1.27□□□□□ -2.21
UBR4Q5T4S7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.27□□□□□ -2.21
UBR4Q5T4S7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms