Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AC078899.5-201ENST00000612475 178 ntBASIC4.84□□□□□ -1.63
CCDC93Q567U6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC93Q567U6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC93Q567U6 AC018555.1-201ENST00000567548 1980 ntBASIC4.84□□□□□ -1.64
CCDC93Q567U6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 ELL2P4-201ENST00000446870 1376 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 RNU6-1243P-201ENST00000364028 107 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 MIR634-201ENST00000385208 97 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AL121972.1-201ENST00000402023 252 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 MTCYBP36-201ENST00000404146 440 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC109780.2-201ENST00000413467 845 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 RPL31P2-201ENST00000413849 377 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC245052.5-201ENST00000416320 649 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 RPS27AP14-201ENST00000422868 454 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 FTH1P6-201ENST00000430768 320 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AL159987.2-201ENST00000432754 307 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 RPL23AP16-201ENST00000441715 421 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 FABP3P2-201ENST00000453169 399 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 RAD23BP3-201ENST00000454157 1152 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 SNRPGP5-201ENST00000456003 220 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC087879.1-201ENST00000474343 374 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 RNF138P1-201ENST00000502765 546 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC091489.2-201ENST00000566263 604 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC011471.1-201ENST00000585766 187 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 NDUFA8P1-201ENST00000605525 367 ntBASIC4.83□□□□□ -1.64
CCDC93Q567U6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC93Q567U6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC93Q567U6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 RNU6-517P-201ENST00000384362 110 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 HMGB1P17-201ENST00000403495 628 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 RNA5SP306-201ENST00000411087 107 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AL133384.1-201ENST00000412744 351 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 UBE2V1P10-201ENST00000414685 269 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 RPL21P32-201ENST00000419877 477 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 RPL7P30-201ENST00000420888 709 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 CKS1BP5-201ENST00000434172 273 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 USP9YP7-201ENST00000436723 430 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AL590399.6-201ENST00000446396 307 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 USP9YP32-201ENST00000452432 430 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 RPL21P11-201ENST00000461458 483 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC093809.1-201ENST00000509155 340 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC008127.2-201ENST00000549925 1075 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC245505.1-201ENST00000556398 224 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 AP000403.1-201ENST00000603349 851 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC091805.2-201ENST00000603848 235 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC93Q567U6 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 AC233309.1-201ENST00000619522 751 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
CCDC93Q567U6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC93Q567U6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms